Paper · 2014 · International Journal of Phytopathology

Characterization of a Novel Resistance-Breaking Isolate of Potato Virus Y in Nicotiana Tabacum

Jae-Hyun Kim; Young-Soo Kim; Soo-Won Jang; et al.

8
claims
16
verbatim quotes
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citations
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Open access · cc-by

Abstract

Potato virus Y (PVY) was identified from a PVY-resistance flue-cured tobacco variety KF120 showing vein necrosis at Buron province, Korea. Biological properties of the isolate named PVY-ToBR1 was characterized using various host plants with another isolate PVY-ToJC37. The isolated PVY-ToBR1 induced systemic vein necrosis symptoms on a PVY-resistant tobacco cultivar (VAM) harboring potyvirus resistant va gene, though tissue printing showed the systemic movement of virus was slightly delayed. By contrast, the isolate PVY-ToJC37 failed to infect VAM plants and the virus was not detected on inoculated leaf and systemic leaves in VAM plants. Similarly, the isolated PVY-ToBR1 induced distinctly systemic vein necrosis symptoms on PVY-resistant tobacco cultivars (V.SCR, PBD6, TN86, TN90, Virgin A Mutant, NC744, and Wislica) that have the recessive potyvirus resistance gene va, but PVY-ToJC37 did not infect systemically infect these tobacco cultivars, suggesting that PVY-ToBR1 is a novel resistance-breaking isolate in tobacco. The coat protein (CP) genes of PVY-ToBR1 and PVY-ToJC37 were amplified using RT-PCR assays with specific primers for PVY isolates and nucleotide sequences of the CP genes were determined. The isolate PVY-ToBR1 showed 88.4% - 99.4% and 86.6% - 99.4% CP identities to the 46 different PVY isolates at the nucleotide and amino acid, respectively. Phylogenetic relationship from CP comparisons showed that PVY-ToBR1 isolate clustered with PVYNTN isolates and PVY-ToBR1 isolate more closely related to the isolates from European than from North American PVY NTN.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

PVY-ToBR1 induced systemic vein necrosis symptoms on the PVY-resistant tobacco cultivar VAM.

Material
VAMe2
Interactor
PVY-ToBR1e2pathogen
Outcome
systemic vein necrosis symptomse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e1

“Potato virus Y (PVY) was identified from a PVY-resistance flue-cured tobacco variety KF120 showing vein necrosis at Buron province, Korea”

✓ located verbatim in the source · abstract, characters 0–137 · show in text ↑
e2

“The isolated PVY-ToBR1 induced systemic vein necrosis symptoms on a PVY-resistant tobacco cultivar (VAM) harboring potyvirus resistant va gene, though tissue printing showed the systemic movement of virus was slightly delayed”

✓ located verbatim in the source · abstract, characters 269–494 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Systemic movement of PVY-ToBR1 in VAM plants was slightly delayed.

Material
VAMe2
Interactor
PVY-ToBR1e2pathogen
Outcome
systemic movement of viruse2
Direction
slightly delayede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e1

“Potato virus Y (PVY) was identified from a PVY-resistance flue-cured tobacco variety KF120 showing vein necrosis at Buron province, Korea”

✓ located verbatim in the source · abstract, characters 0–137 · show in text ↑
e2

“The isolated PVY-ToBR1 induced systemic vein necrosis symptoms on a PVY-resistant tobacco cultivar (VAM) harboring potyvirus resistant va gene, though tissue printing showed the systemic movement of virus was slightly delayed”

✓ located verbatim in the source · abstract, characters 269–494 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

PVY-ToJC37 failed to infect VAM plants, and the virus was not detected in inoculated or systemic leaves.

Material
VAMe3
Interactor
PVY-ToJC37e3pathogen
Outcome
the virus was not detected on inoculated leaf and systemic leavese3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e1

“Potato virus Y (PVY) was identified from a PVY-resistance flue-cured tobacco variety KF120 showing vein necrosis at Buron province, Korea”

✓ located verbatim in the source · abstract, characters 0–137 · show in text ↑
e3

“By contrast, the isolate PVY-ToJC37 failed to infect VAM plants and the virus was not detected on inoculated leaf and systemic leaves in VAM plants”

✓ located verbatim in the source · abstract, characters 496–643 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

PVY-ToBR1 induced systemic vein necrosis symptoms on PVY-resistant tobacco cultivars carrying the recessive va gene.

Material
V.SCR, PBD6, TN86, TN90, Virgin A Mutant, NC744, and Wislicae4
Interactor
PVY-ToBR1e4pathogen
Gene
vae4
Outcome
systemic vein necrosis symptomse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e1

“Potato virus Y (PVY) was identified from a PVY-resistance flue-cured tobacco variety KF120 showing vein necrosis at Buron province, Korea”

✓ located verbatim in the source · abstract, characters 0–137 · show in text ↑
e4

“Similarly, the isolated PVY-ToBR1 induced distinctly systemic vein necrosis symptoms on PVY-resistant tobacco cultivars (V.SCR, PBD6, TN86, TN90, Virgin A Mutant, NC744, and Wislica) that have the recessive potyvirus resistance gene va”

✓ located verbatim in the source · abstract, characters 645–880 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The CP sequence of PVY-ToBR1 showed 88.4% - 99.4% nucleotide identity to 46 PVY isolates.

Interactor
PVY-ToBR1e6pathogen
Outcome
CP identitiese6
Value
88.4% - 99.4%e6
Qualifier
at the nucleotidee6
Comparator
46 different PVY isolatese6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e1

“Potato virus Y (PVY) was identified from a PVY-resistance flue-cured tobacco variety KF120 showing vein necrosis at Buron province, Korea”

✓ located verbatim in the source · abstract, characters 0–137 · show in text ↑
e6

“The isolate PVY-ToBR1 showed 88.4% - 99.4% and 86.6% - 99.4% CP identities to the 46 different PVY isolates at the nucleotide and amino acid, respectively”

✓ located verbatim in the source · abstract, characters 1222–1376 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The CP sequence of PVY-ToBR1 showed 86.6% - 99.4% amino acid identity to 46 PVY isolates.

Interactor
PVY-ToBR1e6pathogen
Outcome
CP identitiese6
Value
86.6% - 99.4%e6
Qualifier
amino acide6
Comparator
46 different PVY isolatese6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e1

“Potato virus Y (PVY) was identified from a PVY-resistance flue-cured tobacco variety KF120 showing vein necrosis at Buron province, Korea”

✓ located verbatim in the source · abstract, characters 0–137 · show in text ↑
e6

“The isolate PVY-ToBR1 showed 88.4% - 99.4% and 86.6% - 99.4% CP identities to the 46 different PVY isolates at the nucleotide and amino acid, respectively”

✓ located verbatim in the source · abstract, characters 1222–1376 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

PVY-ToBR1 clustered with PVYNTN isolates in the phylogenetic analysis of CP sequences.

Interactor
PVY-ToBR1e7pathogen
Outcome
clustered with PVYNTN isolatese7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e1

“Potato virus Y (PVY) was identified from a PVY-resistance flue-cured tobacco variety KF120 showing vein necrosis at Buron province, Korea”

✓ located verbatim in the source · abstract, characters 0–137 · show in text ↑
e7

“Phylogenetic relationship from CP comparisons showed that PVY-ToBR1 isolate clustered with PVYNTN isolates”

✓ located verbatim in the source · abstract, characters 1378–1484 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

PVY-ToBR1 is more closely related to European than to North American PVY NTN isolates.

Interactor
PVY-ToBR1e7pathogen
Outcome
more closely related to the isolates from Europeane7
Direction
more closely relatede7
Comparator
from North American PVY NTNe7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e1

“Potato virus Y (PVY) was identified from a PVY-resistance flue-cured tobacco variety KF120 showing vein necrosis at Buron province, Korea”

✓ located verbatim in the source · abstract, characters 0–137 · show in text ↑
e7

“PVY-ToBR1 isolate more closely related to the isolates from European than from North American PVY NTN”

✓ located verbatim in the source · abstract, characters 1489–1590 · show in text ↑