Paper · 1999 · FEBS Letters

Evidence for an ancient chromosomal duplication in Arabidopsis thaliana by sequencing and analyzing a 400‐kb contig at the APETALA2 locus on chromosome 41

Nancy Terryn; Leo Heijnen; Annick De Keyser; et al.

5
claims
10
verbatim quotes
36
citations
1
research areas
✓
Open access

Abstract

As part of the European Scientists Sequencing Arabidopsis program, a contiguous region (396607 bp) located on chromosome 4 around the APETALA2 gene was sequenced. Analysis of the sequence and comparison to public databases predicts 103 genes in this area, which represents a gene density of one gene per 3.85 kb. Almost half of the genes show no significant homology to known database entries. In addition, the first 45 kb of the contig, which covers 11 genes, is similar to a region on chromosome 2, as far as coding sequences are concerned. This observation indicates that ancient duplications of large pieces of DNA have occurred in Arabidopsis.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 5

Observationobservedoriginal resultmeasured

Claim · model-written summary

The 396607 bp contig contains 103 predicted genes.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
genese1
Value
103e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 51–71 · show in text ↑
e1

“Analysis of the sequence and comparison to public databases predicts 103 genes in this area, which represents a gene density of one gene per 3.85 kb”

✓ located verbatim in the source · abstract, characters 163–311 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The contig has a gene density of one gene per 3.85 kb.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
gene densitye1
Value
one gene per 3.85 kbe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 51–71 · show in text ↑
e1

“Analysis of the sequence and comparison to public databases predicts 103 genes in this area, which represents a gene density of one gene per 3.85 kb”

✓ located verbatim in the source · abstract, characters 163–311 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Almost half of the predicted genes show no significant homology to known database entries.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
genese2
Value
Almost halfe2
Qualifier
no significant homology to known database entriese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 51–71 · show in text ↑
e2

“Almost half of the genes show no significant homology to known database entries”

✓ located verbatim in the source · abstract, characters 313–392 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The first 45 kb of the contig, covering 11 genes, has coding sequences similar to a region on chromosome 2.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
coding sequencese3
Value
45 kbe3
Qualifier
similar to a region on chromosome 2e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 51–71 · show in text ↑
e3

“the first 45 kb of the contig, which covers 11 genes, is similar to a region on chromosome 2, as far as coding sequences are concerned”

✓ located verbatim in the source · abstract, characters 407–541 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Ancient duplications of large pieces of DNA have occurred in Arabidopsis.

Taxon
ArabidopsisArabidopsise4
Outcome
ancient duplications of large pieces of DNAe4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 51–71 · show in text ↑
e4

“This observation indicates that ancient duplications of large pieces of DNA have occurred in Arabidopsis”

✓ located verbatim in the source · abstract, characters 543–647 · show in text ↑