Paper · 2006 · Physiologia Plantarum

Expression of maize D‐type cyclins: comparison, regulation by phytohormones during seed germination and description of a new D cyclin

Francisco Quiroz‐Figueroa; Jorge M. Vázquez‐Ramos

12
claims
24
verbatim quotes
20
citations
1
research areas
✓
Open access

Abstract

While cloning maize D‐type cyclins previously reported in databases (described as of D1, D2 and D4 types), a fourth D cyclin was cloned that showed high homology (75%) with the D1 cyclin. Because this D1 cyclin has been recently described as a D5‐type cyclin (D5;1), the new cyclin was named D5;2. All maize cyclins have been compared among themselves and among D cyclins from other plant species. All maize D cyclins possess the retinoblastoma protein–binding motif and cyclin boxes but no PEST sequences or destruction box sequences are required for protein degradation. D5 and D2 cyclins also have canonical cyclin‐dependent kinase (Cdk)–phosphorylation sites. Every cyclin showed a different expression pattern during seed germination, standing out cyclin D5;2, which seems to be expressed only during the early stages (equivalent to postmitotic interphase), and cyclin D4;1, which progressively accumulates from an almost undetectable level in dry seed embryo axes. Phytohormones like cytokinins and auxins, which accelerate the germination process, change the expression pattern of all cyclins, with cytokinins promoting an increase in expression during the early hours of germination (by 6 h), whereas auxins promote a constant increase in the levels of three out of the four D cyclins (except D5;1). Cyclin D5;1 is the least expressed of all cyclins in all tissues measured (embryo axes, seedlings and plantlets), and all cyclins are expressed in both meristematic and non‐meristematic tissues. We discuss their relevance for the germination process and plantlet establishment.

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Claims 12

Observationobservedoriginal resultmeasured

Claim · model-written summary

a fourth D cyclin

Taxon
maizeZea mayst0
Outcome
a fourth D cycline0
Value
75%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“maize”

✓ located verbatim in the source · title, characters 14–19 · show in text ↑
e0

“a fourth D cyclin was cloned that showed high homology (75%) with the D1 cyclin”

✓ located verbatim in the source · abstract, characters 107–186 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

D5;2

Taxon
maizeZea mayst0
Outcome
D5;2e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“maize”

✓ located verbatim in the source · title, characters 14–19 · show in text ↑
e0

“the new cyclin was named D5;2”

✓ located verbatim in the source · abstract, characters 267–296 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

retinoblastoma protein–binding motif and cyclin boxes

Taxon
maizeZea mayst0
Outcome
retinoblastoma protein–binding motif and cyclin boxese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“maize”

✓ located verbatim in the source · title, characters 14–19 · show in text ↑
e0

“All maize D cyclins possess the retinoblastoma protein–binding motif and cyclin boxes but no PEST sequences or destruction box sequences are required for protein degradation”

✓ located verbatim in the source · abstract, characters 398–571 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

no PEST sequences or destruction box sequences

Taxon
maizeZea mayst0
Outcome
no PEST sequences or destruction box sequencese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“maize”

✓ located verbatim in the source · title, characters 14–19 · show in text ↑
e0

“no PEST sequences or destruction box sequences are required for protein degradation”

✓ located verbatim in the source · abstract, characters 488–571 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

canonical cyclin‐dependent kinase (Cdk)–phosphorylation sites

Taxon
maizeZea mayst0
Outcome
canonical cyclin‐dependent kinase (Cdk)–phosphorylation sitese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“maize”

✓ located verbatim in the source · title, characters 14–19 · show in text ↑
e0

“D5 and D2 cyclins also have canonical cyclin‐dependent kinase (Cdk)–phosphorylation sites”

✓ located verbatim in the source · abstract, characters 573–662 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

different expression pattern

Taxon
maizeZea mayst0
Outcome
different expression patterne0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“maize”

✓ located verbatim in the source · title, characters 14–19 · show in text ↑
e0

“Every cyclin showed a different expression pattern during seed germination”

✓ located verbatim in the source · abstract, characters 664–738 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

expressed only during the early stages

Taxon
maizeZea mayst0
Gene
D5;2e0
Outcome
expressed only during the early stagese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“maize”

✓ located verbatim in the source · title, characters 14–19 · show in text ↑
e0

“cyclin D5;2, which seems to be expressed only during the early stages (equivalent to postmitotic interphase)”

✓ located verbatim in the source · abstract, characters 753–861 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

progressively accumulates

Taxon
maizeZea mayst0
Gene
D4;1e0
Outcome
progressively accumulatese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“maize”

✓ located verbatim in the source · title, characters 14–19 · show in text ↑
e0

“cyclin D4;1, which progressively accumulates from an almost undetectable level in dry seed embryo axes”

✓ located verbatim in the source · abstract, characters 867–969 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

increase in expression

Taxon
maizeZea mayst0
Treatment
cytokininse0
Outcome
increase in expressione0
Direction
increasee0
Value
6 he0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“maize”

✓ located verbatim in the source · title, characters 14–19 · show in text ↑
e0

“cytokinins promoting an increase in expression during the early hours of germination (by 6 h)”

✓ located verbatim in the source · abstract, characters 1106–1199 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

constant increase in the levels of three out of the four D cyclins

Taxon
maizeZea mayst0
Treatment
auxinse0
Outcome
constant increase in the levels of three out of the four D cyclinse0
Direction
increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“maize”

✓ located verbatim in the source · title, characters 14–19 · show in text ↑
e0

“auxins promote a constant increase in the levels of three out of the four D cyclins (except D5;1)”

✓ located verbatim in the source · abstract, characters 1209–1306 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

least expressed

Taxon
maizeZea mayst0
Gene
D5;1e0
Outcome
least expressede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“maize”

✓ located verbatim in the source · title, characters 14–19 · show in text ↑
e0

“Cyclin D5;1 is the least expressed of all cyclins in all tissues measured (embryo axes, seedlings and plantlets)”

✓ located verbatim in the source · abstract, characters 1308–1420 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

expressed in both meristematic and non‐meristematic tissues

Taxon
maizeZea mayst0
Outcome
expressed in both meristematic and non‐meristematic tissuese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“maize”

✓ located verbatim in the source · title, characters 14–19 · show in text ↑
e0

“all cyclins are expressed in both meristematic and non‐meristematic tissues”

✓ located verbatim in the source · abstract, characters 1426–1501 · show in text ↑

class · molecular: expression · Zea mays (maize)Positive and negative results

18 papers: 14 positive, 4 negative or no effect

13 papers in the same direction as this paper · 4 in the opposite direction

  1. no effect
  2. positive
  3. positive

14 papers more in this group

See all 18 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.