Paper · 2004 · Genes & Development

Conserved MYC transcription factors play a key role in jasmonate signaling both in tomato and Arabidopsis

Marta Boter; Omar Ruíz-Rivero; Ashraf Abdeen; et al.

13
claims
22
verbatim quotes
617
citations
2
research areas
✓
Open access

Abstract

Jasmonates (JA) are important regulators of plant defense responses that activate expression of many wound-induced genes including the tomato proteinase inhibitor II (pin2) and leucine aminopeptidase (LAP) genes. Elements required for JA induction of the LAP gene are all present in the -317 to -78 proximal promoter region. Using yeast one-hybrid screening, we have identified the bHLH-leu zipper JAMYC2 and JAMYC10 proteins, specifically recognizing a T/G-box AACGTG motif in this promoter fragment. Mutation of the G-box element decreases JA-responsive LAP promoter expression. Expression of JAMYC2 and JAMYC10 is induced by JA, with a kinetics that precedes that of the LAP or pin2 transcripts. JAMYC overexpression enhanced JA-induced expression of these defense genes in potato, but did not result in constitutive transcript accumulation. Using footprinting assays, an additional protected element was identified, located directly adjacent to the T/G-box motif. Mutation of this element abolishes JA response, showing that recognition of this duplicated element is also required for gene expression. Knockout mutants in the AtMYC2 homolog gene of Arabidopsis are insensitive to JA and exhibit a decreased activation of the JA-responsive genes AtVSP and JR1. Activation of the PDF1.2 and b-CHI, ethylene/JA-responsive genes, is, however, increased in these mutants. These results show that the JAMYC/AtMYC2 transcription factors function as members of a MYC-based regulatory system conserved in dicotyledonous plants with a key role in JA-induced defense gene activation.

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Claims 13

Observationobservedoriginal resultmeasured

Claim · model-written summary

The tomato LAP promoter contains elements required for jasmonate induction in its -317 to -78 region.

Gene
LAPe0
Outcome
Elements required for JA inductione0
Value
-317 to -78e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Elements required for JA induction of the LAP gene are all present in the -317 to -78 proximal promoter region.”

✓ located verbatim in the source · abstract, characters 213–324 · show in text ↑
t0

“tomato and Arabidopsis”

✓ located verbatim in the source · title, characters 83–105 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

JAMYC2 recognizes the T/G-box AACGTG motif in the tomato LAP promoter.

Gene
JAMYC2e0
Outcome
specifically recognizing a T/G-box AACGTG motife0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“we have identified the bHLH-leu zipper JAMYC2 and JAMYC10 proteins, specifically recognizing a T/G-box AACGTG motif in this promoter fragment.”

✓ located verbatim in the source · abstract, characters 359–501 · show in text ↑
t0

“tomato and Arabidopsis”

✓ located verbatim in the source · title, characters 83–105 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

JAMYC10 recognizes the T/G-box AACGTG motif in the tomato LAP promoter.

Gene
JAMYC10e0
Outcome
specifically recognizing a T/G-box AACGTG motife0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“we have identified the bHLH-leu zipper JAMYC2 and JAMYC10 proteins, specifically recognizing a T/G-box AACGTG motif in this promoter fragment.”

✓ located verbatim in the source · abstract, characters 359–501 · show in text ↑
t0

“tomato and Arabidopsis”

✓ located verbatim in the source · title, characters 83–105 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Mutation of the G-box reduces tomato JA-responsive LAP promoter expression.

Treatment
Mutation of the G-box elemente0
Gene
LAPe0
Outcome
JA-responsive LAP promoter expressione0
Direction
decreasese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Mutation of the G-box element decreases JA-responsive LAP promoter expression.”

✓ located verbatim in the source · abstract, characters 502–580 · show in text ↑
t0

“tomato and Arabidopsis”

✓ located verbatim in the source · title, characters 83–105 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JA induces tomato JAMYC2 expression before LAP or pin2 transcripts.

Treatment
JAe0
Gene
JAMYC2e0
Outcome
Expressione0
Direction
inducede0
Qualifier
precedes that of the LAP or pin2 transcriptse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Expression of JAMYC2 and JAMYC10 is induced by JA, with a kinetics that precedes that of the LAP or pin2 transcripts.”

✓ located verbatim in the source · abstract, characters 581–698 · show in text ↑
t0

“tomato and Arabidopsis”

✓ located verbatim in the source · title, characters 83–105 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JA induces tomato JAMYC10 expression before LAP or pin2 transcripts.

Treatment
JAe0
Gene
JAMYC10e0
Outcome
Expressione0
Direction
inducede0
Qualifier
precedes that of the LAP or pin2 transcriptse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Expression of JAMYC2 and JAMYC10 is induced by JA, with a kinetics that precedes that of the LAP or pin2 transcripts.”

✓ located verbatim in the source · abstract, characters 581–698 · show in text ↑
t0

“tomato and Arabidopsis”

✓ located verbatim in the source · title, characters 83–105 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

JAMYC overexpression enhanced JA-induced defense gene expression in potato.

Treatment
JAMYC overexpressione0
Gene
JAMYCe0
Outcome
JA-induced expression of these defense genese0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“JAMYC overexpression enhanced JA-induced expression of these defense genes in potato, but did not result in constitutive transcript accumulation.”

✓ located verbatim in the source · abstract, characters 699–844 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

JAMYC overexpression did not cause constitutive transcript accumulation in potato.

Treatment
JAMYC overexpressione0
Outcome
constitutive transcript accumulatione0
Direction
did not resulte0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“JAMYC overexpression enhanced JA-induced expression of these defense genes in potato, but did not result in constitutive transcript accumulation.”

✓ located verbatim in the source · abstract, characters 699–844 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A protected element adjacent to the tomato T/G-box motif was identified.

Outcome
additional protected elemente0
Qualifier
directly adjacent to the T/G-box motife0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“an additional protected element was identified, located directly adjacent to the T/G-box motif.”

✓ located verbatim in the source · abstract, characters 872–967 · show in text ↑
t0

“tomato and Arabidopsis”

✓ located verbatim in the source · title, characters 83–105 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Mutation of the adjacent element abolishes tomato JA response.

Treatment
Mutation of this elemente0
Outcome
JA responsee0
Direction
abolishese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Mutation of this element abolishes JA response, showing that recognition of this duplicated element is also required for gene expression.”

✓ located verbatim in the source · abstract, characters 968–1105 · show in text ↑
t0

“tomato and Arabidopsis”

✓ located verbatim in the source · title, characters 83–105 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Arabidopsis AtMYC2 knockout mutants were insensitive to JA.

Taxon
ArabidopsisArabidopsise0
Material
Knockout mutantse0
Gene
AtMYC2e0
Outcome
insensitive to JAe0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Knockout mutants in the AtMYC2 homolog gene of Arabidopsis are insensitive to JA and exhibit a decreased activation of the JA-responsive genes AtVSP and JR1.”

✓ located verbatim in the source · abstract, characters 1106–1263 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Arabidopsis AtMYC2 knockout mutants had decreased AtVSP and JR1 activation.

Taxon
ArabidopsisArabidopsise0
Treatment
Knockout mutants in the AtMYC2 homolog genee0
Gene
AtVSP and JR1e0
Outcome
activation of the JA-responsive genes AtVSP and JR1e0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Knockout mutants in the AtMYC2 homolog gene of Arabidopsis are insensitive to JA and exhibit a decreased activation of the JA-responsive genes AtVSP and JR1.”

✓ located verbatim in the source · abstract, characters 1106–1263 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Activation of Arabidopsis PDF1.2 and b-CHI increased in AtMYC2 mutants.

Taxon
ArabidopsisArabidopsist0
Material
these mutantse0
Gene
PDF1.2 and b-CHIe0
Outcome
Activation of the PDF1.2 and b-CHIe0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Activation of the PDF1.2 and b-CHI, ethylene/JA-responsive genes, is, however, increased in these mutants.”

✓ located verbatim in the source · abstract, characters 1264–1370 · show in text ↑
t0

“tomato and Arabidopsis”

✓ located verbatim in the source · title, characters 83–105 · show in text ↑

jasmonic acid · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

7 papers: 5 positive, 2 negative or no effect

4 papers in the same direction as this paper · 2 in the opposite direction

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loss of function · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

80 papers: 20 positive, 60 negative or no effect

59 papers in the same direction as this paper · 20 in the opposite direction

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.