Paper · 2008 · Archives of Phytopathology and Plant Protection

Molecular studies onTomato aspermy virusisolates infecting chrysanthemums

N. Verma; K. Kumar; S. Kulshrestha; et al.

15
claims
25
verbatim quotes
22
citations
2
research areas
—
Not open access

Abstract

Abstract Tomato aspermy virus (TAV), an important viral pathogen of chrysanthemums, was detected by double antibody sandwich-enzyme linked immunosorbent assay (DAS-ELISA) from chrysanthemums exhibiting mottling and deformed inflorescence grown in various states of India. Out of 15 cultivars (cvs.) tested, 11 (73.3%) were found to be positive for TAV. On sap inoculation the virus produced local lesions on Chenopodium spp. and Cucumis sativus. Nicotiana clevelandii, N. glutinosa, N. megalosiphon and N. tabacum reacted systemically to the virus producing severe mosaic, leaf deformation and characteristic leaf enations. Tomato plants produced malformed fruits (2-3/plant) with a few seeds. Myzus persicae and Aphis gossypii transmitted the virus non-persistently. Electron microscopy of partially purified viral preparations revealed polyhedral virions (ca. 29 nm dia). Cytopathology of infected leaves of N. clevelandii showed crystalline inclusions containing virions in the central vacuole of infected cells. The virions showed very good clumping with antiserum to TAV in liquid phase immuno-electron microscopy. Slot blot hybridization was performed to detect the virus in various chrysanthemum cultivars. The virus positivity was confirmed by reverse transcription-polymerase chain reaction (RT-PCR) and nucleotide sequencing of coat protein gene (CP). The amplified 657 bp fragment was about 97% identical with respect to CP sequences of other TAV isolates available in the database. In terms of derived amino acid sequence similarity, the homology value was 99%. In order to amplify RNA 1, RNA 2 and RNA 3, multiplex RT-PCR was performed. High genetic similarities of CP gene of TAV Indian isolates with that of other isolates of TAV indicate their probable common ancestry.

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Claims 15

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

TAV was detected in symptomatic chrysanthemums grown across India.

Taxon
chrysanthemumsChrysanthemume0
Interactor
Tomato aspermy virusTomato aspermy viruse0pathogen
Outcome
TAVe0
Setting
Indiae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum
Chrysanthemum · Taxon · picture from its Wikimedia Commons categoryLucia Condac · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Tomato aspermy virus (TAV), an important viral pathogen of chrysanthemums, was detected by double antibody sandwich-enzyme linked immunosorbent assay (DAS-ELISA) from chrysanthemums exhibiting mottling and deformed inflorescence grown in various states of India.”

✓ located verbatim in the source · abstract, characters 9–271 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Eleven of 15 chrysanthemum cultivars tested positive for TAV.

Taxon
chrysanthemumsChrysanthemumt0
Interactor
TAVTomato aspermy viruse0pathogen
Outcome
positive for TAVe0
Value
11 (73.3%)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum
Chrysanthemum · Taxon · picture from its Wikimedia Commons categoryLucia Condac · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Out of 15 cultivars (cvs.) tested, 11 (73.3%) were found to be positive for TAV.”

✓ located verbatim in the source · abstract, characters 272–352 · show in text ↑
t0

“chrysanthemums”

✓ located verbatim in the source · title, characters 59–73 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Sap inoculation produced local lesions on Chenopodium spp.

Taxon
Chenopodium spp.Chenopodiume0
Treatment
sap inoculatione0
Interactor
viruse0pathogen
Outcome
local lesionse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chenopodium
Chenopodium · Taxon · picture of the genus (one of its species)Rasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“On sap inoculation the virus produced local lesions on Chenopodium spp. and Cucumis sativus.”

✓ located verbatim in the source · abstract, characters 353–445 · show in text ↑
e1

“Tomato aspermy virus (TAV)”

✓ located verbatim in the source · abstract, characters 9–35 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Sap inoculation produced local lesions on Cucumis sativus.

Taxon
Cucumis sativusCucumis sativuse0
Treatment
sap inoculatione0
Interactor
viruse0pathogen
Outcome
local lesionse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“On sap inoculation the virus produced local lesions on Chenopodium spp. and Cucumis sativus.”

✓ located verbatim in the source · abstract, characters 353–445 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Four Nicotiana hosts reacted systemically with severe mosaic, leaf deformation and enations.

Taxon
Nicotiana clevelandii, N. glutinosa, N. megalosiphon and N. tabacumNicotiana tabacumNicotiana glutinosaNicotiana clevelandiiNicotiana megalosiphone0
Interactor
viruse0pathogen
Outcome
severe mosaic, leaf deformation and characteristic leaf enationse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗
Nicotiana glutinosa
Nicotiana glutinosa · TaxonUleli · CC BY 3.0 · Wikimedia Commons ↗
Nicotiana clevelandii
Nicotiana clevelandii · TaxonAnthony Valois and the National Park Service · Public domain · Wikimedia Commons ↗
Nicotiana megalosiphon
Nicotiana megalosiphon · TaxonMark Marathon · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Nicotiana clevelandii, N. glutinosa, N. megalosiphon and N. tabacum reacted systemically to the virus producing severe mosaic, leaf deformation and characteristic leaf enations.”

✓ located verbatim in the source · abstract, characters 446–623 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Infected tomato plants produced malformed fruits with few seeds.

Organ / stage
fruitse0
Outcome
malformed fruitse0
Value
2-3/plante0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Tomato plants produced malformed fruits (2-3/plant) with a few seeds.”

✓ located verbatim in the source · abstract, characters 624–693 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Myzus persicae transmitted the virus non-persistently.

Taxon
chrysanthemumsChrysanthemumt0
Interactor
Myzus persicaeMyzus persicaee0pest
Outcome
transmitted the virus non-persistentlye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum
Chrysanthemum · Taxon · picture from its Wikimedia Commons categoryLucia Condac · CC BY 3.0 · Wikimedia Commons ↗
Myzus persicae
Myzus persicae · InteractorScott Bauer · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Myzus persicae and Aphis gossypii transmitted the virus non-persistently.”

✓ located verbatim in the source · abstract, characters 694–767 · show in text ↑
t0

“chrysanthemums”

✓ located verbatim in the source · title, characters 59–73 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Aphis gossypii transmitted the virus non-persistently.

Taxon
chrysanthemumsChrysanthemumt0
Interactor
Aphis gossypiiAphis gossypiie0pest
Outcome
transmitted the virus non-persistentlye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum
Chrysanthemum · Taxon · picture from its Wikimedia Commons categoryLucia Condac · CC BY 3.0 · Wikimedia Commons ↗
Aphis gossypii
Aphis gossypii · InteractorDr Lewis Wilson, CSIRO · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Myzus persicae and Aphis gossypii transmitted the virus non-persistently.”

✓ located verbatim in the source · abstract, characters 694–767 · show in text ↑
t0

“chrysanthemums”

✓ located verbatim in the source · title, characters 59–73 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Electron microscopy revealed polyhedral virions about 29 nm in diameter.

Taxon
chrysanthemumsChrysanthemumt0
Outcome
polyhedral virionse0
Value
ca. 29 nm diae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum
Chrysanthemum · Taxon · picture from its Wikimedia Commons categoryLucia Condac · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Electron microscopy of partially purified viral preparations revealed polyhedral virions (ca. 29 nm dia).”

✓ located verbatim in the source · abstract, characters 768–873 · show in text ↑
t0

“chrysanthemums”

✓ located verbatim in the source · title, characters 59–73 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Infected N. clevelandii cells contained crystalline inclusions with virions in the central vacuole.

Taxon
N. clevelandiiNicotiana clevelandiie0
Organ / stage
leavese0
Outcome
crystalline inclusions containing virions in the central vacuolee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana clevelandii
Nicotiana clevelandii · TaxonAnthony Valois and the National Park Service · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Cytopathology of infected leaves of N. clevelandii showed crystalline inclusions containing virions in the central vacuole of infected cells.”

✓ located verbatim in the source · abstract, characters 874–1015 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Virions clumped strongly with TAV antiserum in immuno-electron microscopy.

Taxon
chrysanthemumsChrysanthemumt0
Outcome
very good clumping with antiserum to TAVe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum
Chrysanthemum · Taxon · picture from its Wikimedia Commons categoryLucia Condac · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The virions showed very good clumping with antiserum to TAV in liquid phase immuno-electron microscopy.”

✓ located verbatim in the source · abstract, characters 1016–1119 · show in text ↑
t0

“chrysanthemums”

✓ located verbatim in the source · title, characters 59–73 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

RT-PCR and coat protein sequencing confirmed TAV positivity in chrysanthemum cultivars.

Taxon
chrysanthemumChrysanthemume1
Gene
coat protein gene (CP)e0
Outcome
virus positivitye0

Not reportedComparatorValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum
Chrysanthemum · Taxon · picture from its Wikimedia Commons categoryLucia Condac · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The virus positivity was confirmed by reverse transcription-polymerase chain reaction (RT-PCR) and nucleotide sequencing of coat protein gene (CP).”

✓ located verbatim in the source · abstract, characters 1214–1361 · show in text ↑
e1

“various chrysanthemum cultivars”

✓ located verbatim in the source · abstract, characters 1181–1212 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The amplified TAV coat protein fragment was about 97% identical to other isolates.

Taxon
chrysanthemumsChrysanthemumt0
Gene
CPe0
Outcome
identical with respect to CP sequencese0
Value
about 97%e0
Comparator
other TAV isolatese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum
Chrysanthemum · Taxon · picture from its Wikimedia Commons categoryLucia Condac · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The amplified 657 bp fragment was about 97% identical with respect to CP sequences of other TAV isolates available in the database.”

✓ located verbatim in the source · abstract, characters 1362–1493 · show in text ↑
t0

“chrysanthemums”

✓ located verbatim in the source · title, characters 59–73 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Derived amino acid sequences had 99% homology.

Taxon
chrysanthemumsChrysanthemumt0
Outcome
derived amino acid sequence similaritye0
Value
99%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum
Chrysanthemum · Taxon · picture from its Wikimedia Commons categoryLucia Condac · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In terms of derived amino acid sequence similarity, the homology value was 99%.”

✓ located verbatim in the source · abstract, characters 1494–1573 · show in text ↑
t0

“chrysanthemums”

✓ located verbatim in the source · title, characters 59–73 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

High coat protein gene similarity indicates probable common ancestry of Indian and other TAV isolates.

Taxon
chrysanthemumsChrysanthemumt0
Gene
CP genee0
Outcome
probable common ancestrye0
Comparator
other isolates of TAVe0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum
Chrysanthemum · Taxon · picture from its Wikimedia Commons categoryLucia Condac · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“High genetic similarities of CP gene of TAV Indian isolates with that of other isolates of TAV indicate their probable common ancestry.”

✓ located verbatim in the source · abstract, characters 1650–1785 · show in text ↑
t0

“chrysanthemums”

✓ located verbatim in the source · title, characters 59–73 · show in text ↑

inoculation · disease · Cucumis sativus (cucumber)Positive and negative results

83 papers: 50 positive, 33 negative or no effect

32 papers in the same direction as this paper · 50 in the opposite direction

  1. positive
  2. positive
  3. positive

79 papers more in this group

See all 83 papers →

inoculation · disease · ChenopodiumResults agree

3 papers: 0 positive, 3 negative or no effect

2 papers in the same direction as this paper

  1. negative
  2. no effect
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.