Paper · 2008 · Journal of Life Science

Genetic and Phylogenetic Relationships of Genus Hemerocallis in Korea Using ISSR

Joo-Soo Choi; Hong-Wook Huh; Seol-A Lee; et al.

7
claims
12
verbatim quotes
2
citations
1
research areas
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Open access

Abstract

원추리속(Genus Hemerocallis) 식물은 초본이며 일부 종은 약용으로 매우 중요하다. 이 속내 8개 분류군에 대해 ISSR (inter simple sequence repeats) 마커로 계통학적 관계를 분석하였다. 조사한 식물은 원추리(Hemerocallis fulva), 왕원추리(H. fulva for. kwanso), 각시원추리(H. dumortieri), 골잎원추리(H. coreana), 홍도원추리(H. hongdoensis), 큰원추리(H. middendorffi), 노랑원추리(H. thunbergii), 애기원추리(H. minor)이다. 또한 이들 분류군에 대한 유전적 변이와 구조를 조사하였다. 종간 유전적 다양도는 $0.068{\sim}0.123$이며 평균 유전적 다양도는 0.098로 전반적으로 낮았다. 애기원추리가 가장 높은 값을 나타내었다. 세대 당 이주하는 개체수는 매우 적었다(Nm=0.128). 원추리속 종은 계통도에서 세 분지군으로 나누어졌다. 한 그룹은 H. fulva, H. fulva for. kwanso, H. middendorffi였다. 다른 그룹은 Hemerocallis, H. dumortieri, H. thunbergii, H. minor였다. 나머지는 H. coreana와 H. hongdoensis로 두 번째 그룹과 자매군을 형성하였다. 비록 종 내 적은 개체수로 분석하였지만 원추리속 식물종이 ISSR 마커로 잘 분리되었다. Genus Hemerocallis is a herbaceous species and some species among their taxa are very important herbal medicines. We evaluated representative samples of the eight taxa in Korea with inter simple sequence repeats (ISSR) markers to estimate phylogenetic relationships within taxa of this genus. The studied taxa were Hemerocallis fulva L., H. fulva for. kwanso, H. dumortieri Morren, H. coreana Nakai, H. hongdoensis M.G.Chung & S.S.Kang, H. middendorffi Trautv. et Mayer, H. thunbergii Baker, H. minor Miller. In addition, we investigated the genetic variation and structure of Korean populations of these taxa. The mean genetic diversity was 0.098 across species, varying from 0.068 to 0.123. A low level of genetic variation was found in populations of Hemerocallis species. Specially, gene diversity for H. minor was maintained the highest among genus Hemerocallis. An indirect estimate of the number of migrants per generation (Nm=0.218) indicated that gene flow was not extensive among Korean populations of Hemerocallis species. The phylogenic tree showed distinct three clades. One includes H. fulva, H. fulva for. kwanso and H. middendorffi. Another includes three Hemerocallis species, H. dumortieri, H. thunbergii and H. minor. The H. coreana and H. hongdoensis were shown as the sister group to the second clades. Although the size of sampling was not large enough for eight Korean Hemerocallis species, the analyses of ISSRs will certainly provide an enhanced view on the phylogeny of species.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

Mean genetic diversity of Korean Hemerocallis taxa was 0.098, varying from 0.068 to 0.123, which is low overall.

Taxon
HemerocallisHemerocallist0
Outcome
mean genetic diversitye0
Value
0.098e0
Qualifier
varying from 0.068 to 0.123e0
Setting
Koreat0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis
Hemerocallis · Taxon · picture of the genus (one of its species)en:User:Laineypaige · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The mean genetic diversity was 0.098 across species, varying from 0.068 to 0.123”

✓ located verbatim in the source · abstract, characters 1332–1412 · show in text ↑
e1

“A low level of genetic variation was found in populations of Hemerocallis species”

✓ located verbatim in the source · abstract, characters 1414–1495 · show in text ↑
t0

“Genetic and Phylogenetic Relationships of Genus Hemerocallis in Korea Using ISSR”

✓ located verbatim in the source · title, characters 0–80 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Hemerocallis minor had the highest gene diversity among the Hemerocallis species studied.

Outcome
gene diversitye2
Qualifier
the higheste2
Comparator
genus Hemerocallise2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis minor
Hemerocallis minor · TaxonLouise Wolff -- darina 23:53, 6 May 2005 (UTC) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e2

“Specially, gene diversity for H. minor was maintained the highest among genus Hemerocallis”

✓ located verbatim in the source · abstract, characters 1497–1587 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Gene flow among Korean Hemerocallis populations was not extensive, as indicated by an indirect estimate of Nm=0.218.

Taxon
Hemerocallis speciesHemerocallise3
Outcome
gene flowe3
Value
0.218e3
Qualifier
not extensivee3
Setting
Korean populationse3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis
Hemerocallis · Taxon · picture of the genus (one of its species)en:User:Laineypaige · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e3

“An indirect estimate of the number of migrants per generation (Nm=0.218) indicated that gene flow was not extensive among Korean populations of Hemerocallis species”

✓ located verbatim in the source · abstract, characters 1589–1753 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The phylogenetic tree of the Korean Hemerocallis taxa showed three distinct clades.

Taxon
HemerocallisHemerocallist0
Outcome
phylogenic treee4
Value
three cladese4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis
Hemerocallis · Taxon · picture of the genus (one of its species)en:User:Laineypaige · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e4

“The phylogenic tree showed distinct three clades”

✓ located verbatim in the source · abstract, characters 1755–1803 · show in text ↑
t0

“Genetic and Phylogenetic Relationships of Genus Hemerocallis in Korea Using ISSR”

✓ located verbatim in the source · title, characters 0–80 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

H. fulva, H. fulva for. kwanso and H. middendorffi formed one of the three clades.

Outcome
phylogenic treee4
Value
three cladese4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis fulva
Hemerocallis fulva · TaxonW. Bulach · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e4

“The phylogenic tree showed distinct three clades”

✓ located verbatim in the source · abstract, characters 1755–1803 · show in text ↑
e5

“One includes H. fulva, H. fulva for. kwanso and H. middendorffi”

✓ located verbatim in the source · abstract, characters 1805–1868 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

H. dumortieri, H. thunbergii and H. minor formed another of the three clades.

Taxon
H. dumortieriHemerocallis dumortierie6
Outcome
phylogenic treee4
Value
three cladese4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis dumortieri
Hemerocallis dumortieri · TaxonΣ64 · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e4

“The phylogenic tree showed distinct three clades”

✓ located verbatim in the source · abstract, characters 1755–1803 · show in text ↑
e6

“Another includes three Hemerocallis species, H. dumortieri, H. thunbergii and H. minor”

✓ located verbatim in the source · abstract, characters 1870–1956 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

H. coreana and H. hongdoensis were a sister group to the second clade.

Taxon
H. coreana and H. hongdoensisHemerocallis coreanaHemerocallis hongdoensise7
Outcome
sister group to the second cladese7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hemerocallis coreana
Hemerocallis coreana · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗
Hemerocallis hongdoensis
Hemerocallis hongdoensis · Taxonshinkimmm · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e7

“The H. coreana and H. hongdoensis were shown as the sister group to the second clades”

✓ located verbatim in the source · abstract, characters 1958–2043 · show in text ↑