Paper · 2005 · Plant Disease

Alternaria yaliinficiens sp. nov. on Ya Li Pear Fruit: From Interception to Identification

Rodney G. Roberts

7
claims
14
verbatim quotes
27
citations
5
research areas
—
Not open access

Abstract

In 2001, numerous Ya Li pear fruit from China with a disease apparently caused by an Alternaria sp. were intercepted at U.S. ports, raising concern because the disease was unknown in the United States. To identify the etiologic agent of the disease, single-spore cultures were established from intercepted fruit and were characterized by pathogenicity to wounded fruit, morphology, and sporulation pattern on three agar media, random amplified polymorphic DNA fragment pattern analysis, and species-specific polymerase chain reaction (PCR). These data indicated that the disease likely was caused by more than one species of Alternaria, and that none of the isolates from intercepted Ya Li fruit was A. alternata or A. gaisen. A species-specific PCR assay for A. gaisen demonstrated that no isolate from Ya Li was A. gaisen. A PCR assay for the AMT gene demonstrated that no isolate from Ya Li was A. 'mali'. Because of these data and the absence of a description to accommodate at least one of the taxa involved, A. yaliinficiens R. G. Roberts sp. nov. is described, and the disease caused by this and other species of Alternaria on Ya Li pear from China is referred to as "chocolate spot of Ya Li pear" to distinguish it from black spot of Japanese pear.

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Claims 7

Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The pear disease likely involved more than one Alternaria species.

Taxon
Ya Li peare1
Interactor
AlternariaAlternariae0pathogen
Outcome
disease likely was caused by more than one species of Alternariae0
Setting
Chinae1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Alternaria
Alternaria · Interactor · picture of the genus (one of its species)http://phil.cdc.gov/phil_images/20030612/9/PHIL_3963_lores.jpg · Public domain · Wikimedia Commons ↗

Verbatim

e0

“the disease likely was caused by more than one species of Alternaria”

✓ located verbatim in the source · abstract, characters 567–635 · show in text ↑
e1

“Ya Li pear fruit from China”

✓ located verbatim in the source · abstract, characters 18–45 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

None of the Alternaria isolates from Ya Li pear was A. alternata.

Taxon
Ya Li peare1
Interactor
A. alternataAlternaria alternatae0pathogen
Outcome
none of the isolates from intercepted Ya Li fruit was A. alternatae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Alternaria alternata
Alternaria alternata · Interactor · picture from its Wikimedia Commons categoryMarta Hiromi Taniwaki, Secretaria de Agricultura e Abastecimento · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“none of the isolates from intercepted Ya Li fruit was A. alternata or A. gaisen”

✓ located verbatim in the source · abstract, characters 646–725 · show in text ↑
e1

“Ya Li pear fruit”

✓ located verbatim in the source · abstract, characters 18–34 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

None of the Alternaria isolates from Ya Li pear was A. gaisen.

Taxon
Ya Li peare1
Interactor
A. gaisenAlternaria gaisene0pathogen
Outcome
isolates from intercepted Ya Li fruite0

Verbatim

e0

“none of the isolates from intercepted Ya Li fruit was A. alternata or A. gaisen”

✓ located verbatim in the source · abstract, characters 646–725 · show in text ↑
e1

“Ya Li pear fruit”

✓ located verbatim in the source · abstract, characters 18–34 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

A species-specific PCR assay found no A. gaisen isolate from Ya Li.

Taxon
Ya Li peare1
Interactor
A. gaisenAlternaria gaisene0pathogen
Outcome
no isolate from Ya Li was A. gaisene0

Not reportedComparatorValue

Verbatim

e0

“A species-specific PCR assay for A. gaisen demonstrated that no isolate from Ya Li was A. gaisen”

✓ located verbatim in the source · abstract, characters 727–823 · show in text ↑
e1

“Ya Li pear fruit”

✓ located verbatim in the source · abstract, characters 18–34 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

An AMT PCR assay found no Ya Li isolate to be A. mali.

Taxon
Ya Li peare1
Interactor
A. 'mali'e0pathogen
Gene
AMT genee0
Outcome
no isolate from Ya Li was A. 'mali'e0

Verbatim

e0

“A PCR assay for the AMT gene demonstrated that no isolate from Ya Li was A. 'mali'”

✓ located verbatim in the source · abstract, characters 825–907 · show in text ↑
e1

“Ya Li pear fruit”

✓ located verbatim in the source · abstract, characters 18–34 · show in text ↑
Observationobservedoriginal resultbasis n/a

Claim · model-written summary

The authors described A. yaliinficiens as a new species associated with Ya Li pear.

Taxon
Ya Li peare1
Interactor
A. yaliinficiense0pathogen
Outcome
A. yaliinficiens R. G. Roberts sp. nov. is describede0

Verbatim

e0

“A. yaliinficiens R. G. Roberts sp. nov. is described”

✓ located verbatim in the source · abstract, characters 1014–1066 · show in text ↑
e1

“Ya Li pear from China”

✓ located verbatim in the source · abstract, characters 1134–1155 · show in text ↑
Observationobservedoriginal resultbasis n/a

Claim · model-written summary

The authors named the Ya Li pear disease chocolate spot of Ya Li pear.

Taxon
Ya Li peare0
Interactor
AlternariaAlternariae0pathogen
Outcome
chocolate spot of Ya Li peare0
Setting
Chinae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Alternaria
Alternaria · Interactor · picture of the genus (one of its species)http://phil.cdc.gov/phil_images/20030612/9/PHIL_3963_lores.jpg · Public domain · Wikimedia Commons ↗

Verbatim

e0

“the disease caused by this and other species of Alternaria on Ya Li pear from China is referred to as "chocolate spot of Ya Li pear"”

✓ located verbatim in the source · abstract, characters 1072–1204 · show in text ↑
e1

“black spot of Japanese pear”

✓ located verbatim in the source · abstract, characters 1228–1255 · show in text ↑