Paper · 2008 · Genome

Diversity in coffee assessed with SSR markers: structure of the genus Coffea and perspectives for breeding

Philippe Cubry; Pascal Musoli; Hyacinte Legnaté; et al.

2
claims
4
verbatim quotes
74
citations
4
research areas
—
Not open access

Abstract

The present study shows transferability of microsatellite markers developed in the two cultivated coffee species (Coffea arabica L. and C. canephora Pierre ex Froehn.) to 15 species representing the previously identified main groups of the genus Coffea. Evaluation of the genetic diversity and available resources within Coffea and development of molecular markers transferable across species are important steps for breeding of the two cultivated species. We worked on 15 species with 60 microsatellite markers developed using different strategies (SSR-enriched libraries, BAC libraries, gene sequences). We focused our analysis on 4 species used for commercial or breeding purposes. Our results establish the high transferability of microsatellite markers within Coffea. We show the large amount of diversity available within wild species for breeding applications. Finally we discuss the consequences for future comparative mapping studies and breeding of the two cultivated species.

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Claims 2

Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Microsatellite markers showed high transferability within Coffea.

Taxon
CoffeaCoffeae0
Outcome
transferability of microsatellite markerse0
Direction
highe0

Not reportedComparatorValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Our results establish the high transferability of microsatellite markers within Coffea.”

✓ located verbatim in the source · abstract, characters 685–772 · show in text ↑
t0

“coffee”

✓ located verbatim in the source · title, characters 13–19 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Wild Coffea species contained a large amount of diversity available for breeding.

Taxon
CoffeaCoffeae1
Outcome
diversity available within wild speciese0
Direction
large amounte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“We show the large amount of diversity available within wild species for breeding applications.”

✓ located verbatim in the source · abstract, characters 773–867 · show in text ↑
e1

“genus Coffea”

✓ located verbatim in the source · abstract, characters 240–252 · show in text ↑