Paper · 2004 · Plant Pathology

Weather‐based prediction of anthracnose severity using artificial neural network models

S. Chakraborty; R. Ghosh; M. Ghosh; et al.

9
claims
18
verbatim quotes
43
citations
2
research areas
✓
Open access

Abstract

Data were collected and analysed from seven field sites in Australia, Brazil and Colombia on weather conditions and the severity of anthracnose disease of the tropical pasture legume Stylosanthes scabra caused by Colletotrichum gloeosporioides . Disease severity and weather data were analysed using artificial neural network (ANN) models developed using data from some or all field sites in Australia and/or South America to predict severity at other sites. Three series of models were developed using different weather summaries. Of these, ANN models with weather for the day of disease assessment and the previous 24 h period had the highest prediction success, and models trained on data from all sites within one continent correctly predicted disease severity in the other continent on more than 75% of days; the overall prediction error was 21·9% for the Australian and 22·1% for the South American model. Of the six cross‐continent ANN models trained on pooled data for five sites from two continents to predict severity for the remaining sixth site, the model developed without data from Planaltina in Brazil was the most accurate, with >85% prediction success, and the model without Carimagua in Colombia was the least accurate, with only 54% success. In common with multiple regression models, moisture‐related variables such as rain, leaf surface wetness and variables that influence moisture availability such as radiation and wind on the day of disease severity assessment or the day before assessment were the most important weather variables in all ANN models. A set of weights from the ANN models was used to calculate the overall risk of anthracnose for the various sites. Sites with high and low anthracnose risk are present in both continents, and weather conditions at centres of diversity in Brazil and Colombia do not appear to be more conducive than conditions in Australia to serious anthracnose development.

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Claims 9

Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Models using assessment-day and preceding 24-hour weather had the highest prediction success.

Taxon
Stylosanthes scabraStylosanthes scabrae1
Outcome
prediction successe0
Direction
higheste0
Comparator
higheste0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Stylosanthes scabra
Stylosanthes scabra · TaxonJoão Medeiros · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“ANN models with weather for the day of disease assessment and the previous 24 h period had the highest prediction success”

✓ located verbatim in the source · abstract, characters 542–663 · show in text ↑
e1

“Stylosanthes scabra caused by Colletotrichum gloeosporioides”

✓ located verbatim in the source · abstract, characters 183–243 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Cross-continent predictions from all-site continental models succeeded on more than 75% of days.

Taxon
Stylosanthes scabraStylosanthes scabrae1
Outcome
correctly predicted disease severitye0
Value
more than 75% of dayse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Stylosanthes scabra
Stylosanthes scabra · TaxonJoão Medeiros · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“models trained on data from all sites within one continent correctly predicted disease severity in the other continent on more than 75% of days”

✓ located verbatim in the source · abstract, characters 669–812 · show in text ↑
e1

“Stylosanthes scabra caused by Colletotrichum gloeosporioides”

✓ located verbatim in the source · abstract, characters 183–243 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The Australian model had 21·9% overall prediction error.

Taxon
Stylosanthes scabraStylosanthes scabrae1
Outcome
overall prediction errore0
Value
21·9%e0

Not reportedMaterial

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Stylosanthes scabra
Stylosanthes scabra · TaxonJoão Medeiros · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“the overall prediction error was 21·9% for the Australian and 22·1% for the South American model”

✓ located verbatim in the source · abstract, characters 814–910 · show in text ↑
e1

“Stylosanthes scabra caused by Colletotrichum gloeosporioides”

✓ located verbatim in the source · abstract, characters 183–243 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The South American model had 22·1% overall prediction error.

Taxon
Stylosanthes scabraStylosanthes scabrae1
Outcome
overall prediction errore0
Value
22·1%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Stylosanthes scabra
Stylosanthes scabra · TaxonJoão Medeiros · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“the overall prediction error was 21·9% for the Australian and 22·1% for the South American model”

✓ located verbatim in the source · abstract, characters 814–910 · show in text ↑
e1

“Stylosanthes scabra caused by Colletotrichum gloeosporioides”

✓ located verbatim in the source · abstract, characters 183–243 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The model excluding Planaltina was the most accurate, exceeding 85% prediction success.

Taxon
Stylosanthes scabraStylosanthes scabrae1
Outcome
prediction successe0
Direction
most accuratee0
Value
>85%e0
Setting
Planaltina in Brazile0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Stylosanthes scabra
Stylosanthes scabra · TaxonJoão Medeiros · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“the model developed without data from Planaltina in Brazil was the most accurate, with >85% prediction success”

✓ located verbatim in the source · abstract, characters 1058–1168 · show in text ↑
e1

“Stylosanthes scabra caused by Colletotrichum gloeosporioides”

✓ located verbatim in the source · abstract, characters 183–243 · show in text ↑
Method / resourceobservedoriginal resultnegativemeasured

Claim · model-written summary

The model excluding Carimagua was least accurate, with 54% success.

Taxon
Stylosanthes scabraStylosanthes scabrae1
Outcome
successe0
Direction
least accuratee0
Value
54%e0
Setting
Carimagua in Colombiae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Stylosanthes scabra
Stylosanthes scabra · TaxonJoão Medeiros · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“the model without Carimagua in Colombia was the least accurate, with only 54% success”

✓ located verbatim in the source · abstract, characters 1174–1259 · show in text ↑
e1

“Stylosanthes scabra caused by Colletotrichum gloeosporioides”

✓ located verbatim in the source · abstract, characters 183–243 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Moisture-related weather variables were most important in all ANN models.

Taxon
Stylosanthes scabraStylosanthes scabrae1
Outcome
most important weather variablese0
Comparator
all ANN modelse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Stylosanthes scabra
Stylosanthes scabra · TaxonJoão Medeiros · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“moisture‐related variables such as rain, leaf surface wetness and variables that influence moisture availability such as radiation and wind on the day of disease severity assessment or the day before assessment were the most important weather variables in all ANN models”

✓ located verbatim in the source · abstract, characters 1304–1574 · show in text ↑
e1

“Stylosanthes scabra caused by Colletotrichum gloeosporioides”

✓ located verbatim in the source · abstract, characters 183–243 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

High and low anthracnose risk sites occurred on both continents.

Taxon
Stylosanthes scabraStylosanthes scabrae1
Interactor
Colletotrichum gloeosporioidesColletotrichum gloeosporioidese1pathogen
Outcome
high and low anthracnose riske0
Setting
both continentse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Stylosanthes scabra
Stylosanthes scabra · TaxonJoão Medeiros · CC BY 2.0 · Wikimedia Commons ↗
Colletotrichum gloeosporioides
Colletotrichum gloeosporioides · InteractorRGimilio · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Sites with high and low anthracnose risk are present in both continents”

✓ located verbatim in the source · abstract, characters 1690–1761 · show in text ↑
e1

“Stylosanthes scabra caused by Colletotrichum gloeosporioides”

✓ located verbatim in the source · abstract, characters 183–243 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Weather at Brazilian and Colombian diversity centres appeared no more conducive to serious anthracnose than Australian conditions.

Taxon
Stylosanthes scabraStylosanthes scabrae1
Interactor
Colletotrichum gloeosporioidesColletotrichum gloeosporioidese1pathogen
Outcome
serious anthracnose developmente0
Direction
do not appear to be more conducivee0
Comparator
conditions in Australiae0
Setting
Brazil and Colombiae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Stylosanthes scabra
Stylosanthes scabra · TaxonJoão Medeiros · CC BY 2.0 · Wikimedia Commons ↗
Colletotrichum gloeosporioides
Colletotrichum gloeosporioides · InteractorRGimilio · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“weather conditions at centres of diversity in Brazil and Colombia do not appear to be more conducive than conditions in Australia to serious anthracnose development”

✓ located verbatim in the source · abstract, characters 1767–1931 · show in text ↑
e1

“Stylosanthes scabra caused by Colletotrichum gloeosporioides”

✓ located verbatim in the source · abstract, characters 183–243 · show in text ↑