Paper · 2007 · OakTrust (Texas A&M University Libraries)

Molecular biology study of satellite panicum mosaic virus capsid protein

Qi Dong

14
claims
28
verbatim quotes
1
citations
1
research areas
—
Not open access

Abstract

Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants. The positive-sense single-stranded genomic RNA of SPMV encodes a 17-kDa capsid protein (CP) to form 16-nm virions. Previous studies showed that SPMV CP has multiple functions during infection including encapsidation, symptom exacerbation, inhibiting the accumulation of SPMV DIs, and facilitating systemic movement. This dissertation confirms and extends the results of our previous reports with new biological and biochemical evidence. For example, the dosage effect of SPMV CP on symptom severity supports its function as a pathogenicity factor. Biological assays also demonstrate compensatory effects of SPMV CP on virus mutants defective in systemic movement. In addition, it is shown for the first time that SPMV CP is involved in cellto- cell movement of SPMV RNA and associated with the cell wall and membranes, a signature property of plant virus movement proteins. However, SPMV CP in the cytosol exists exclusively as virions and is dispensable for symptom exacerbation. SPMV CP contains a distinctive N-terminal arginine-rich motif (N-ARM), which is required for the in vitro binding of SPMV and PMV genomic RNAs by SPMV CP. Mutations of this region impair all known functions of SPMV CP. Interestingly, manipulation of the C-terminus of SPMV CP resulted in the same phenotypes as alterations in the N-ARM except that this does not affect the RNA binding activity of SPMV CP. Biological experiments demonstrate that virions are not required for the properties of SPMV CP to facilitate local and systemic movement and inhibit the accumulation of SPMV DIs, suggesting that SPMV CP and RNA form alternative complexes for these purposes. This dissertation study reveals the nucleolar localization of SPMV CP and its interaction with PMV CP in the form of virions. The identification of distinct functional domains of SPMV CP and its complex subcellular localization profile resulted in the proposal of a tentative model on how the functions of SPMV CP are coordinated for a robust infection. This dissertation provides a foundation for further understanding of the complex interactions among host plants, helper viruses, and satellites.

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Claims 14

Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

The dosage of SPMV CP affects symptom severity, supporting its role as a pathogenicity factor.

Taxon
host plantse1
Interactor
Satellite panicum mosaic virusPanicum mosaic satellite viruse1pathogen
Gene
SPMV CPe2
Outcome
symptom severitye2

Not reportedDirection

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“the dosage effect of SPMV CP on symptom severity supports its function as a pathogenicity factor”

✓ located verbatim in the source · abstract, characters 582–678 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SPMV CP shows compensatory effects on virus mutants defective in systemic movement in host plants.

Taxon
host plantse1
Treatment
virus mutants defective in systemic movemente2
Interactor
Satellite panicum mosaic virusPanicum mosaic satellite viruse1pathogen
Gene
SPMV CPe2
Outcome
systemic movemente2

Not reportedComparatorDirection

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“Biological assays also demonstrate compensatory effects of SPMV CP on virus mutants defective in systemic movement”

✓ located verbatim in the source · abstract, characters 680–794 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

SPMV CP is involved in cell-to-cell movement of SPMV RNA in host plants.

Taxon
host plantse1
Gene
SPMV CPe2
Outcome
cellto- cell movement of SPMV RNAe2

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“it is shown for the first time that SPMV CP is involved in cellto- cell movement of SPMV RNA”

✓ located verbatim in the source · abstract, characters 809–901 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

SPMV CP is dispensable for symptom exacerbation in host plants.

Taxon
host plantse1
Gene
SPMV CPe2
Outcome
symptom exacerbatione2

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“However, SPMV CP in the cytosol exists exclusively as virions and is dispensable for symptom exacerbation”

✓ located verbatim in the source · abstract, characters 1006–1111 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

SPMV CP in the cytosol exists exclusively as virions.

Taxon
host plantse1
Gene
SPMV CPe2
Outcome
exists exclusively as virionse2

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“However, SPMV CP in the cytosol exists exclusively as virions and is dispensable for symptom exacerbation”

✓ located verbatim in the source · abstract, characters 1006–1111 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The N-terminal arginine-rich motif of SPMV CP is required for in vitro binding of SPMV and PMV genomic RNAs.

Taxon
host plantse1
Gene
N-terminal arginine-rich motif (N-ARM)e2
Outcome
in vitro binding of SPMV and PMV genomic RNAse2

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“SPMV CP contains a distinctive N-terminal arginine-rich motif (N-ARM), which is required for the in vitro binding of SPMV and PMV genomic RNAs by SPMV CP. Mutations of this region impair all known functions of SPMV CP”

✓ located verbatim in the source · abstract, characters 1113–1330 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Mutations of the N-ARM region impair all known functions of SPMV CP.

Taxon
host plantse1
Treatment
Mutations of this regione2
Gene
SPMV CPe2
Outcome
all known functions of SPMV CPe2
Direction
impaire2

Not reportedComparator

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“SPMV CP contains a distinctive N-terminal arginine-rich motif (N-ARM), which is required for the in vitro binding of SPMV and PMV genomic RNAs by SPMV CP. Mutations of this region impair all known functions of SPMV CP”

✓ located verbatim in the source · abstract, characters 1113–1330 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Manipulation of the C-terminus of SPMV CP gives the same phenotypes as alterations in the N-ARM.

Taxon
host plantse1
Treatment
manipulation of the C-terminus of SPMV CPe2
Gene
SPMV CPe2
Outcome
phenotypese2
Comparator
alterations in the N-ARMe2

Not reportedDirection

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“Interestingly, manipulation of the C-terminus of SPMV CP resulted in the same phenotypes as alterations in the N-ARM except that this does not affect the RNA binding activity of SPMV CP”

✓ located verbatim in the source · abstract, characters 1332–1517 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Manipulation of the C-terminus of SPMV CP does not affect its RNA binding activity.

Taxon
host plantse1
Treatment
manipulation of the C-terminus of SPMV CPe2
Gene
SPMV CPe2
Outcome
RNA binding activity of SPMV CPe2
Direction
does not affecte2

Not reportedComparator

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“Interestingly, manipulation of the C-terminus of SPMV CP resulted in the same phenotypes as alterations in the N-ARM except that this does not affect the RNA binding activity of SPMV CP”

✓ located verbatim in the source · abstract, characters 1332–1517 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Virions are not required for SPMV CP to facilitate local and systemic movement.

Taxon
host plantse1
Gene
SPMV CPe2
Outcome
local and systemic movemente2
Qualifier
virions are not requirede2

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“Biological experiments demonstrate that virions are not required for the properties of SPMV CP to facilitate local and systemic movement and inhibit the accumulation of SPMV DIs”

✓ located verbatim in the source · abstract, characters 1519–1696 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Virions are not required for SPMV CP to inhibit the accumulation of SPMV DIs.

Taxon
host plantse1
Gene
SPMV CPe2
Outcome
accumulation of SPMV DIse2
Qualifier
virions are not requirede2

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“Biological experiments demonstrate that virions are not required for the properties of SPMV CP to facilitate local and systemic movement and inhibit the accumulation of SPMV DIs”

✓ located verbatim in the source · abstract, characters 1519–1696 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

SPMV CP and RNA may form alternative complexes for facilitating movement and inhibiting DI accumulation.

Taxon
host plantse1
Gene
SPMV CPe2
Outcome
alternative complexese2

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“suggesting that SPMV CP and RNA form alternative complexes for these purposes”

✓ located verbatim in the source · abstract, characters 1698–1775 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

SPMV CP localizes to the nucleolus.

Taxon
host plantse1
Gene
SPMV CPe2
Outcome
nucleolar localizatione2

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“This dissertation study reveals the nucleolar localization of SPMV CP and its interaction with PMV CP in the form of virions”

✓ located verbatim in the source · abstract, characters 1777–1901 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

SPMV CP interacts with PMV CP in the form of virions.

Taxon
host plantse1
Interactor
Panicum mosaic virusPanicum mosaic viruse1other
Gene
SPMV CPe2
Outcome
interaction with PMV CPe2
Qualifier
in the form of virionse2

Verbatim

e1

“Satellite panicum mosaic virus (SPMV) depends on its helper Panicum mosaic virus (PMV) for replication and movement in host plants”

✓ located verbatim in the source · abstract, characters 0–130 · show in text ↑
e2

“This dissertation study reveals the nucleolar localization of SPMV CP and its interaction with PMV CP in the form of virions”

✓ located verbatim in the source · abstract, characters 1777–1901 · show in text ↑