Paper · 2004 · Journal of Pharmaceutical and Biomedical Sciences

Cloning and characterization of seed-specific expression f128 gene in setaria italica

Jing Xue; Jingjuan Yu; Qian Zhao; et al.

6
claims
12
verbatim quotes
1
citations
1
research areas
—
Not open access

Abstract

A seed-specific expression gene (f128) was isolated from Setaria italica cDNA library. Sequence analysis indicated that the f128 gene was composed of 581 nt which was deduced containing an open reading frame coding for a 9.1 kD polypeptide of 85 amino acid residues(Accession No. of f128 in genBank:AY327511). The results of analysis by Biology Software showed that in the structure of the deduced protein the hydrophobic domain was dominant. It seems to have a cleavable N-terminal signal sequence, and it may entry to a secretory pathway. Genomic Southern blotting analysis indicated that f128 was one copy in genome of the millet. Northern blotting analysis showed that f128 mRNA only was accumulated in developing seeds.

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Claims 6

Observationobservedoriginal resultmeasured

Claim · model-written summary

f128 mRNA accumulated only in developing seeds.

Taxon
Setaria italicaSetaria italicae1
Organ / stage
developing seedse6
Gene
f128e6
Outcome
f128 mRNAe6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e1

“A seed-specific expression gene (f128) was isolated from Setaria italica cDNA library”

✓ located verbatim in the source · abstract, characters 0–85 · show in text ↑
e6

“Northern blotting analysis showed that f128 mRNA only was accumulated in developing seeds”

✓ located verbatim in the source · abstract, characters 634–723 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The f128 gene contains an open reading frame coding for a 9.1 kD polypeptide of 85 amino acid residues.

Taxon
Setaria italicaSetaria italicae1
Gene
f128 genee2
Outcome
open reading frame coding for a 9.1 kD polypeptidee2
Value
9.1 kDe2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e1

“A seed-specific expression gene (f128) was isolated from Setaria italica cDNA library”

✓ located verbatim in the source · abstract, characters 0–85 · show in text ↑
e2

“the f128 gene was composed of 581 nt which was deduced containing an open reading frame coding for a 9.1 kD polypeptide of 85 amino acid residues”

✓ located verbatim in the source · abstract, characters 120–265 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

f128 is present as one copy in the millet genome.

Taxon
Setaria italicaSetaria italicae1
Gene
f128e5
Outcome
genome of the millete5
Value
one copye5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e1

“A seed-specific expression gene (f128) was isolated from Setaria italica cDNA library”

✓ located verbatim in the source · abstract, characters 0–85 · show in text ↑
e5

“Genomic Southern blotting analysis indicated that f128 was one copy in genome of the millet”

✓ located verbatim in the source · abstract, characters 541–632 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The deduced f128 protein has a dominant hydrophobic domain.

Taxon
Setaria italicaSetaria italicae1
Outcome
hydrophobic domaine3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e1

“A seed-specific expression gene (f128) was isolated from Setaria italica cDNA library”

✓ located verbatim in the source · abstract, characters 0–85 · show in text ↑
e3

“in the structure of the deduced protein the hydrophobic domain was dominant”

✓ located verbatim in the source · abstract, characters 366–441 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The deduced f128 protein seems to have a cleavable N-terminal signal sequence.

Taxon
Setaria italicaSetaria italicae1
Outcome
cleavable N-terminal signal sequencee4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e1

“A seed-specific expression gene (f128) was isolated from Setaria italica cDNA library”

✓ located verbatim in the source · abstract, characters 0–85 · show in text ↑
e4

“It seems to have a cleavable N-terminal signal sequence, and it may entry to a secretory pathway”

✓ located verbatim in the source · abstract, characters 443–539 · show in text ↑
Observationhypothesisoriginal resultmeasured

Claim · model-written summary

The f128 protein may enter a secretory pathway.

Taxon
Setaria italicaSetaria italicae1
Outcome
secretory pathwaye4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Setaria italica
Setaria italica · TaxonNo machine-readable author provided. Marknesbitt assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e1

“A seed-specific expression gene (f128) was isolated from Setaria italica cDNA library”

✓ located verbatim in the source · abstract, characters 0–85 · show in text ↑
e4

“It seems to have a cleavable N-terminal signal sequence, and it may entry to a secretory pathway”

✓ located verbatim in the source · abstract, characters 443–539 · show in text ↑