Paper · 2016 · Jurnal Fitopatologi Indonesia/Jurnal Fitopatologi

The Potential of Ochrobactrum intermedium - C939A31, Klebsiella oxytoca - C939A32, Bacillus subtilis - I308A32 Isolated from Coffee Plant for Controlling Root Lesion Nematode Pratylenchus coffeae

Institut Pertanian Bogor; D Halimah; A Munif; et al.

4
claims
8
verbatim quotes
3
citations
1
research areas
✓
Open access · cc-by-sa

Abstract

Infection of root lession nematode, Pratylenchus coffeae, becomes an important factor causing yield loss in coffee production in Indonesia. Biological control of P. coffeae needs to be developed to meet the requirement of environmentally save crop production. The research was conducted to evaluate 3 selected endophytic bacteria isolates, Ochrobactrum intermedium DSQ5, Klebsiella oxytoca NGB-FR 50, and Bacillus subtilis AIMST 10.T18.1, from coffee in controlling P. coffeae. Research methods involved pathogenicity test based on hypersensitive reaction and haemolysis test, and evaluation of their ability to suppress P. coffeae in vitro and in planta. The hypersensitive and haemolysis reactions indicated that these 3 isolates showed negative result both to plant and human. In vitro assays showed that two isolates, K. oxytoca - C939A32 and O. intermedium - C939A3, could suppress P. coffeae populations by 66.7% and 100%. Those results correlated positively with in planta assay’s result.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-sa. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 4

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

In vitro, K. oxytoca isolate C939A32 suppressed Pratylenchus coffeae populations by 66.7%.

Taxon
Coffee PlantCoffeat0
Treatment
K. oxytoca - C939A32e1
Interactor
P. coffeaePratylenchus coffeaee1pest
Second interactor
K. oxytoca - C939A32Klebsiella oxytocae1biocontrol_agent
Outcome
P. coffeae populationse1
Direction
suppresse1
Value
66.7%e1
Setting
In vitroe1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗
Pratylenchus coffeae
Pratylenchus coffeae · InteractorUSDA ARS · Public domain · Wikimedia Commons ↗
Klebsiella oxytoca
Klebsiella oxytoca · Second interactorRiraq25 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Isolated from Coffee Plant”

✓ located verbatim in the source · title, characters 111–137 · show in text ↑
e1

“In vitro assays showed that two isolates, K. oxytoca - C939A32 and O. intermedium - C939A3, could suppress P. coffeae populations by 66.7% and 100%”

✓ located verbatim in the source · abstract, characters 780–927 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

In vitro, O. intermedium isolate C939A3 suppressed Pratylenchus coffeae populations by 100%.

Taxon
Coffee PlantCoffeat0
Treatment
O. intermedium - C939A3e1
Interactor
P. coffeaePratylenchus coffeaee1pest
Second interactor
O. intermedium - C939A3Brucella intermediae1biocontrol_agent
Outcome
P. coffeae populationse1
Direction
suppresse1
Value
100%e1
Setting
In vitroe1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗
Pratylenchus coffeae
Pratylenchus coffeae · InteractorUSDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

t0

“Isolated from Coffee Plant”

✓ located verbatim in the source · title, characters 111–137 · show in text ↑
e1

“In vitro assays showed that two isolates, K. oxytoca - C939A32 and O. intermedium - C939A3, could suppress P. coffeae populations by 66.7% and 100%”

✓ located verbatim in the source · abstract, characters 780–927 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

In vitro suppression results correlated positively with the in planta results.

Taxon
Coffee PlantCoffeat0
Outcome
resultse2
Direction
positivelye2
Setting
in plantae2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Isolated from Coffee Plant”

✓ located verbatim in the source · title, characters 111–137 · show in text ↑
e2

“Those results correlated positively with in planta”

✓ located verbatim in the source · abstract, characters 929–979 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The three endophytic isolates gave negative hypersensitive and haemolysis reactions, so they were not pathogenic to plant or human.

Taxon
Coffee PlantCoffeat0
Outcome
hypersensitive and haemolysis reactionse3
Qualifier
negative resulte3

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea
Coffea · Taxon · picture of the genus (one of its species)Marcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Isolated from Coffee Plant”

✓ located verbatim in the source · title, characters 111–137 · show in text ↑
e3

“The hypersensitive and haemolysis reactions indicated that these 3 isolates showed negative result both to plant and human”

✓ located verbatim in the source · abstract, characters 656–778 · show in text ↑