Paper · 2016 · Biosystems Diversity

The spectrum of viruses isolated from Pulsatilla pratensis (Ranunculaceae) a native plant of Ukraine

О. А. Shydlovska; Е. N. Andriychuk; T. A. Kompanets

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claims
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verbatim quotes
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citations
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research areas
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Open access · cc-by

Abstract

The article is devoted to virus screening of wild plants of Ukraine’s flora. The object of the research is the Red Book plant Pulsatilla pratensis (L.) Mill., which grows on the territory of Kanev Nature Reserve. Isolated isometric infectious virus-like particles with diameters of 34, 36, 43, 47, 50 and 57 nm were isolated from selected plants of P. pratensis. In our research, determination of the infectious nature of the pathogen, host range, concentration of viruses in plants, species identity and virus isolation from the mixture in mixed viral infections were carried with using indicator plants. The typical viral symptoms were observed on indicator plants: browning of the leaf plate, mottling, chlorosis and necrosis. All symptoms were systemic and could be caused by a variety of viruse species. Virions with sizes from 34 to 43 nm produced the necrotic and chlorotic spotting on Chenopodium amaranticolor Coste and Reyn. On the other hand, virions with sizes from 47 to 57 nm produced the necrosis, chlorosis and deformation of the leaf plates on Cucumis sativus L. That is not typical for viruses previously discovered on P. pratensis. The viruses isolated in these plants viruses were cumulated in small concentrations and rapidly lost their infectivity. The number of isolated viruses was insufficient for their identification. Four bacteriophage isolates with long phage tails of different size were isolated from P. pratensis roots and radical soil. The biological (lytic) activity towards the tracer bacteria, the morphology of negative colonies, and bacteriophage protein structure were characterized. According to our research, it is possible to divide phages into three subgroups that probably correspond to three different types of viruses. Results of the polypeptide analysis may reflect an evolutionary process in a population of phages that had a common ancestor. Comparison of phage proteins of different hosts shows a variety of molecular weights of polypeptides comprising up to several dozens of proteins. The results of the current work lay the basis for studying the spread of viruses in nature and determination of their relationships in biocenoses.

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Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

Infectious virus-like particles of six reported diameters were isolated from P. pratensis.

Taxon
P. pratensise0
Outcome
isometric infectious virus-like particlese0
Value
34, 36, 43, 47, 50 and 57 nme0

Verbatim

e0

“Isolated isometric infectious virus-like particles with diameters of 34, 36, 43, 47, 50 and 57 nm were isolated from selected plants of P. pratensis.”

✓ located verbatim in the source · abstract, characters 213–362 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Indicator plants displayed systemic browning, mottling and chlorosis.

Taxon
indicator plantse0
Outcome
browning of the leaf plate, mottling, chlorosise0
Qualifier
All symptoms were systemice0

Verbatim

e0

“The typical viral symptoms were observed on indicator plants: browning of the leaf plate, mottling, chlorosis and necrosis. All symptoms were systemic and could be caused by a variety of viruse species.”

✓ located verbatim in the source · abstract, characters 606–808 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Indicator plants displayed systemic necrosis.

Taxon
indicator plantse0
Outcome
necrosise0
Qualifier
All symptoms were systemice0

Verbatim

e0

“The typical viral symptoms were observed on indicator plants: browning of the leaf plate, mottling, chlorosis and necrosis. All symptoms were systemic and could be caused by a variety of viruse species.”

✓ located verbatim in the source · abstract, characters 606–808 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Virions of 34 to 43 nm produced necrotic and chlorotic spotting on Chenopodium amaranticolor.

Taxon
Chenopodium amaranticolorChenopodium amaranticolore0
Treatment
Virions with sizes from 34 to 43 nme0
Interactor
Virionse0pathogen
Outcome
necrotic and chlorotic spottinge0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chenopodium amaranticolor
Chenopodium amaranticolor · TaxonZoey Kroll / edibleoffice · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Virions with sizes from 34 to 43 nm produced the necrotic and chlorotic spotting on Chenopodium amaranticolor Coste and Reyn.”

✓ located verbatim in the source · abstract, characters 809–934 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Virions of 47 to 57 nm produced necrosis, chlorosis and leaf deformation on Cucumis sativus.

Taxon
Cucumis sativusCucumis sativuse0
Treatment
virions with sizes from 47 to 57 nme0
Interactor
virionse0pathogen
Outcome
necrosis, chlorosis and deformation of the leaf platese0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“On the other hand, virions with sizes from 47 to 57 nm produced the necrosis, chlorosis and deformation of the leaf plates on Cucumis sativus L.”

✓ located verbatim in the source · abstract, characters 935–1079 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Isolated viruses accumulated in small concentrations.

Taxon
virusesVirusese0
Outcome
small concentrationse0

Not reportedDirection

Verbatim

e0

“The viruses isolated in these plants viruses were cumulated in small concentrations and rapidly lost their infectivity.”

✓ located verbatim in the source · abstract, characters 1151–1270 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Isolated viruses rapidly lost infectivity and were too few for identification.

Taxon
virusesVirusese0
Outcome
infectivitye0
Direction
loste0
Qualifier
The number of isolated viruses was insufficient for their identification.e0

Verbatim

e0

“The viruses isolated in these plants viruses were cumulated in small concentrations and rapidly lost their infectivity. The number of isolated viruses was insufficient for their identification.”

✓ located verbatim in the source · abstract, characters 1151–1344 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Four bacteriophage isolates with long tails of different sizes were isolated from roots and adjacent soil.

Taxon
bacteriophageBacteriophage sp.e0
Organ / stage
rootse0
Outcome
isolates with long phage tails of different sizee0
Value
Foure0

Verbatim

e0

“Four bacteriophage isolates with long phage tails of different size were isolated from P. pratensis roots and radical soil.”

✓ located verbatim in the source · abstract, characters 1345–1468 · show in text ↑

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Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The phages could be divided into three subgroups probably representing three virus types.

Taxon
phagese0
Outcome
three subgroupse0
Qualifier
probably correspond to three different types of virusese0

Verbatim

e0

“According to our research, it is possible to divide phages into three subgroups that probably correspond to three different types of viruses.”

✓ located verbatim in the source · abstract, characters 1623–1764 · show in text ↑

schema checkedfield values found in the cited quotesPermalinkReport an issue

Observationhypothesisoriginal resultmeasured

Claim · model-written summary

Polypeptide analysis may indicate evolution in a phage population sharing a common ancestor.

Taxon
phagese0
Outcome
an evolutionary processe0
Qualifier
may reflecte0

Verbatim

e0

“Results of the polypeptide analysis may reflect an evolutionary process in a population of phages that had a common ancestor.”

✓ located verbatim in the source · abstract, characters 1765–1890 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phage proteins from different hosts showed varied polypeptide molecular weights and up to several dozen proteins.

Taxon
phagee0
Outcome
a variety of molecular weights of polypeptidese0
Qualifier
up to several dozens of proteinse0

Verbatim

e0

“Comparison of phage proteins of different hosts shows a variety of molecular weights of polypeptides comprising up to several dozens of proteins.”

✓ located verbatim in the source · abstract, characters 1891–2036 · show in text ↑