Paper · 2016 · Nematology

Characterisation of some Scutellonema species (Tylenchida: Hoplolaimidae) occurring in Botswana, South Africa, Costa Rica and the USA, with description of S. clavicaudatum sp. n. and a molecular phylogeny of the genus

Esther Van den Berg; Louwrens R. Tiedt; Jason D. Stanley; et al.

11
claims
18
verbatim quotes
12
citations
2
research areas
—
Not open access

Abstract

The genus Scutellonema contains more than 40 species of spiral nematodes with enlarged phasmids called scutella. In this study, we provide morphological and molecular characterisation of S. clavicaudatum sp. n., S. brachyurus , S. bradys , S. cavenessi , S. transvaalense , S. truncatum and Scutellonema sp. A. from North and Central America, and Africa. The new species, S. clavicaudatum sp. n., was found on sugarcane in South Africa and is characterised by a lack of lip annuli as in S. africanum , S. siamense and S. truncatum . The lip region, in both males and females, is conical and marked by six large rectangular blocks separated or fused with the submedian and lateral lip sectors, which surround a round and distinct labial disc. Females of this new species also have large vaginal glands, a functional spermatheca, the lateral field posterior to the scutellum ending in a bluntly pointed shape and a clavate tail. Morphological descriptions, measurements, light and scanning electron microscopic photos and drawings are also given for S. bradys , S. cavenessi , S. transvaalense and S. truncatum . The study of spiral nematode samples from Florida, USA, confirmed the presence of a morphologically and genetically atypical populations of S. bradys . The morphology of the S. bradys population from Bermuda grass in pasture land from central Florida fits that of type specimens of this species, but differs in having a truncate tail terminus rather than round and also a prominent spermatheca filled with flagellate spermatozoa. Other Florida Scutellonema samples analysed in this study belonged to S. cavenessi , a species native to West Africa. This is the first report of S. cavenessi in Florida, where it parasitises the ornamental plant Sansevieria trifasciata . Our study showed a high level of intraspecific variation for Scutellonema rRNA and mtDNA genes, which can reach 5.6% for the D2-D3 of 28S rRNA, 12.9% for the ITS rRNA genes and 14.4% for the COI gene. Phylogenetic relationships within Scutellonema are given as inferred from the analyses of the D2-D3 of 28S rRNA, ITS rRNA and the COI mtDNA gene sequences.

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Claims 11

Observationobservedoriginal resultbasis n/a

Claim · model-written summary

The new species S. clavicaudatum sp. n. was found on sugarcane in South Africa.

Taxon
sugarcanee0
Interactor
S. clavicaudatumScutellonema clavicaudatume0pest
Outcome
new speciese0
Setting
South Africae0

Verbatim

e0

“The new species, S. clavicaudatum sp. n., was found on sugarcane in South Africa”

✓ located verbatim in the source · abstract, characters 355–435 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

S. cavenessi is a first report in Florida, where it parasitises Sansevieria trifasciata.

Taxon
Sansevieria trifasciataDracaena trifasciatae3
Interactor
S. cavenessiScutellonema cavenessie3pest
Outcome
first report of S. cavenessie3
Setting
Floridae3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Dracaena trifasciata
Dracaena trifasciata · TaxonMlogic · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e3

“This is the first report of S. cavenessi in Florida, where it parasitises the ornamental plant Sansevieria trifasciata”

✓ located verbatim in the source · abstract, characters 1659–1777 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Florida samples from Bermuda grass pasture confirmed morphologically and genetically atypical populations of S. bradys.

Taxon
Bermuda grassCynodon dactylone5
Interactor
S. bradysScutellonema bradyse4pest
Outcome
morphologically and genetically atypical populationse4
Setting
central Floridae5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cynodon dactylon
Cynodon dactylon · TaxonRobert Flogaus-Faust · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e4

“confirmed the presence of a morphologically and genetically atypical populations of S. bradys”

✓ located verbatim in the source · abstract, characters 1167–1260 · show in text ↑
e5

“The morphology of the S. bradys population from Bermuda grass in pasture land from central Florida fits that of type specimens of this species, but differs in having a truncate tail terminus rather than round”

✓ located verbatim in the source · abstract, characters 1263–1471 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The S. bradys population from Bermuda grass has a truncate tail terminus rather than a round one.

Taxon
Bermuda grassCynodon dactylone5
Interactor
S. bradysScutellonema bradyse5pest
Outcome
truncate tail terminuse5
Qualifier
rather than rounde5
Setting
central Floridae5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cynodon dactylon
Cynodon dactylon · TaxonRobert Flogaus-Faust · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e5

“The morphology of the S. bradys population from Bermuda grass in pasture land from central Florida fits that of type specimens of this species, but differs in having a truncate tail terminus rather than round”

✓ located verbatim in the source · abstract, characters 1263–1471 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The S. bradys population from Bermuda grass has a prominent spermatheca filled with flagellate spermatozoa.

Taxon
Bermuda grassCynodon dactylone5
Interactor
S. bradysScutellonema bradyse5pest
Outcome
prominent spermathecae6
Qualifier
filled with flagellate spermatozoae6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cynodon dactylon
Cynodon dactylon · TaxonRobert Flogaus-Faust · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e5

“The morphology of the S. bradys population from Bermuda grass in pasture land from central Florida fits that of type specimens of this species, but differs in having a truncate tail terminus rather than round”

✓ located verbatim in the source · abstract, characters 1263–1471 · show in text ↑
e6

“also a prominent spermatheca filled with flagellate spermatozoa”

✓ located verbatim in the source · abstract, characters 1476–1539 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Other Florida Scutellonema samples belonged to S. cavenessi, a species native to West Africa.

Taxon
ScutellonemaScutellonemae7
Outcome
Other Florida Scutellonema samplese7
Qualifier
belonged to S. cavenessie7

Verbatim

e7

“Other Florida Scutellonema samples analysed in this study belonged to S. cavenessi, a species native to West Africa”

✓ located after whitespace/quote normalisation · abstract, characters 1541–1657 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Intraspecific variation in the D2-D3 region of 28S rRNA can reach 5.6% in Scutellonema.

Taxon
ScutellonemaScutellonemae0
Gene
28S rRNAe1
Outcome
intraspecific variatione0
Value
5.6%e1

Verbatim

e0

“Our study showed a high level of intraspecific variation for Scutellonema rRNA and mtDNA genes”

✓ located verbatim in the source · abstract, characters 1780–1874 · show in text ↑
e1

“which can reach 5.6% for the D2-D3 of 28S rRNA”

✓ located verbatim in the source · abstract, characters 1876–1922 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Intraspecific variation in the ITS rRNA genes can reach 12.9% in Scutellonema.

Taxon
ScutellonemaScutellonemae0
Gene
ITS rRNAe1
Outcome
intraspecific variatione0
Value
12.9%e1

Verbatim

e0

“Our study showed a high level of intraspecific variation for Scutellonema rRNA and mtDNA genes”

✓ located verbatim in the source · abstract, characters 1780–1874 · show in text ↑
e1

“12.9% for the ITS rRNA genes”

✓ located verbatim in the source · abstract, characters 1924–1952 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Intraspecific variation in the COI gene can reach 14.4% in Scutellonema.

Taxon
ScutellonemaScutellonemae0
Gene
COIe1
Outcome
intraspecific variatione0
Value
14.4%e1

Verbatim

e0

“Our study showed a high level of intraspecific variation for Scutellonema rRNA and mtDNA genes”

✓ located verbatim in the source · abstract, characters 1780–1874 · show in text ↑
e1

“14.4% for the COI gene”

✓ located verbatim in the source · abstract, characters 1957–1979 · show in text ↑
Observationobservedoriginal resultbasis n/a

Claim · model-written summary

S. clavicaudatum sp. n. is characterised by a lack of lip annuli.

Taxon
sugarcanee0
Outcome
lip annulie1
Qualifier
a lack of lip annulie1

Verbatim

e0

“The new species, S. clavicaudatum sp. n., was found on sugarcane in South Africa”

✓ located verbatim in the source · abstract, characters 355–435 · show in text ↑
e1

“characterised by a lack of lip annuli”

✓ located verbatim in the source · abstract, characters 443–480 · show in text ↑
Observationobservedoriginal resultbasis n/a

Claim · model-written summary

The lip region of S. clavicaudatum sp. n. is marked by six large rectangular blocks.

Taxon
sugarcanee0
Outcome
lip regione2
Qualifier
marked by six large rectangular blockse2

Verbatim

e0

“The new species, S. clavicaudatum sp. n., was found on sugarcane in South Africa”

✓ located verbatim in the source · abstract, characters 355–435 · show in text ↑
e2

“The lip region, in both males and females, is conical and marked by six large rectangular blocks separated or fused with the submedian and lateral lip sectors”

✓ located verbatim in the source · abstract, characters 533–691 · show in text ↑