Paper · 2016 · OpenMETU (Middle East Technical University)

Molecular Phylogeny of Triticum and Aegilops Genera Based on Its and Matk Sequence Data

Ayten Dizkırıcı; Çiğdem Kansu; Sertaç Önde

7
claims
7
verbatim quotes
6
citations
2
research areas
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Open access · cc-by-nc-nd

Abstract

Understanding the phylogenetic relationship between Triticum and Aegilops species, which form a vast gene pool of wheat, is very important for breeding new cultivated wheat varieties. In the present study, phylogenetic relationships between Triticum (12 samples from 4 species) and Aegilops (24 samples from 8 species) were investigated using sequences of the nuclear ITS rDNA gene and partial sequences of the matK gene of chloroplast genome. The phylogenetic relationships among species were reconstructed using Maximum Likelihood method. The constructed tree based on the sequences of the nuclear component (ITS) displayed a close relationship between polyploid wheats and Aegilops speltoides species which provided new evidence for the source of the enigmatic B genome donor as Ae. speltoides. Concurrent clustering of Ae. cylindrica and Ae. tauschii and their close positioning to polyploid wheats pointed the source of the D genome as one of these species. As reported before, diploid Triticum species (i.e. T. urartu) were identified as the A genome donors and the positioning of these diploid wheats on the constructed tree are meaningful. The constructed tree based on the chloroplastic matK sequences displayed same relationship between polyploid wheats and Ae. speltoides species providing evidence for the later species being the chloroplast donors for polyploid wheats. Therefore, our results supported the idea of coinheritance of nuclear and chloroplast genomes where Ae. speltoides was the maternal donor. For both trees the remaining Aegilops species produced a distinct cluster whereas with the exception of T. urartu, diploid Triticum species displayed a monophyletic structure.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

ITS tree places polyploid wheats close to Aegilops speltoides, supporting it as B genome donor.

Taxon
polyploid wheatse0
Gene
B genomee0
Outcome
close relationship between polyploid wheats and Aegilops speltoides speciese0

Verbatim

e0

“The constructed tree based on the sequences of the nuclear component (ITS) displayed a close relationship between polyploid wheats and Aegilops speltoides species which provided new evidence for the source of the enigmatic B genome donor as Ae. speltoides”

✓ located verbatim in the source · abstract, characters 541–796 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Ae. cylindrica and Ae. tauschii clustered together near polyploid wheats, pointing to one as D genome source.

Taxon
polyploid wheatse0
Gene
D genomee0
Outcome
source of the D genome as one of these speciese0

Verbatim

e0

“Concurrent clustering of Ae. cylindrica and Ae. tauschii and their close positioning to polyploid wheats pointed the source of the D genome as one of these species”

✓ located verbatim in the source · abstract, characters 798–961 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Diploid Triticum species including T. urartu were identified as A genome donors.

Taxon
diploid Triticum speciese0
Gene
A genomee0
Outcome
A genome donorse0

Verbatim

e0

“diploid Triticum species (i.e. T. urartu) were identified as the A genome donors”

✓ located verbatim in the source · abstract, characters 983–1063 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The matK tree linked polyploid wheats with Ae. speltoides, supporting the latter as chloroplast donor.

Taxon
polyploid wheatse0
Gene
matKe0
Outcome
chloroplast donors for polyploid wheatse0

Verbatim

e0

“The constructed tree based on the chloroplastic matK sequences displayed same relationship between polyploid wheats and Ae. speltoides species providing evidence for the later species being the chloroplast donors for polyploid wheats”

✓ located verbatim in the source · abstract, characters 1148–1381 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Results supported Ae. speltoides as maternal donor through coinheritance of nuclear and chloroplast genomes.

Taxon
Ae. speltoidese0
Outcome
maternal donore0

Verbatim

e0

“our results supported the idea of coinheritance of nuclear and chloroplast genomes where Ae. speltoides was the maternal donor”

✓ located verbatim in the source · abstract, characters 1394–1520 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Remaining Aegilops species formed a distinct cluster in both trees.

Taxon
Aegilops speciesAegilopse0
Outcome
distinct clustere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Aegilops
Aegilops · TaxonJavier martin · Public domain · Wikimedia Commons ↗

Verbatim

e0

“For both trees the remaining Aegilops species produced a distinct cluster”

✓ located verbatim in the source · abstract, characters 1522–1595 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Diploid Triticum species except T. urartu formed a monophyletic structure.

Taxon
diploid Triticum speciese0
Outcome
monophyletic structuree0

Verbatim

e0

“with the exception of T. urartu, diploid Triticum species displayed a monophyletic structure”

✓ located verbatim in the source · abstract, characters 1604–1696 · show in text ↑