Paper · 2019 · Mitochondrial DNA Part B

Complete chloroplast genome sequence of Musa banksii and its phylogenetic analysis

Jin Liu; Cheng-Wen Gao; Ying-Feng Niu

9
claims
18
verbatim quotes
4
citations
2
research areas
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Open access · cc-by

Abstract

Musa banksii is a species of wild banana in the genus Musa, native to New Guinea, Manus, northern Australia and some islands of eastern Indonesia. In this study, the chloroplast genome sequence of M. banksii been assembled and characterized by Illumina sequencing. The complete chloroplast genome was 170,010 bp in length, containing a large single copy region (LSC) of 88,373 bp and a small single copy region (SSC) of 10,769 bp, which were separated by a pair of 35,434 bp inverted repeat regions (IRs). A total of 136 genes were predicted, including 113 unique genes consisting of 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Maximum-likelihood phylogenetic analysis of 11 representative plastomes within the order Zingiberales suggests that M. banksii closely related to the Musa ornata and Musa acuminata.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

The complete chloroplast genome is 170,010 bp long.

Taxon
Musa banksiiMusa banksiit0
Outcome
complete chloroplast genomee0
Value
170,010 bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa banksii
Musa banksii · TaxonSteve Fitzgerald · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The complete chloroplast genome was 170,010 bp in length”

✓ located verbatim in the source · abstract, characters 265–321 · show in text ↑
t0

“Musa banksii”

✓ located verbatim in the source · title, characters 40–52 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The large single copy region is 88,373 bp.

Taxon
Musa banksiiMusa banksiit0
Outcome
large single copy region (LSC)e0
Value
88,373 bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa banksii
Musa banksii · TaxonSteve Fitzgerald · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“containing a large single copy region (LSC) of 88,373 bp”

✓ located verbatim in the source · abstract, characters 323–379 · show in text ↑
t0

“Musa banksii”

✓ located verbatim in the source · title, characters 40–52 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The small single copy region is 10,769 bp.

Taxon
Musa banksiiMusa banksiit0
Outcome
small single copy region (SSC)e0
Value
10,769 bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa banksii
Musa banksii · TaxonSteve Fitzgerald · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“a small single copy region (SSC) of 10,769 bp”

✓ located verbatim in the source · abstract, characters 384–429 · show in text ↑
t0

“Musa banksii”

✓ located verbatim in the source · title, characters 40–52 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The inverted repeat regions are 35,434 bp each.

Taxon
Musa banksiiMusa banksiit0
Outcome
inverted repeat regions (IRs)e0
Value
35,434 bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa banksii
Musa banksii · TaxonSteve Fitzgerald · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“a pair of 35,434 bp inverted repeat regions (IRs)”

✓ located verbatim in the source · abstract, characters 455–504 · show in text ↑
t0

“Musa banksii”

✓ located verbatim in the source · title, characters 40–52 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The genome contains 136 predicted genes, including 113 unique genes.

Taxon
Musa banksiiMusa banksiit0
Outcome
genes were predictede0
Value
136 genese0
Qualifier
113 unique genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa banksii
Musa banksii · TaxonSteve Fitzgerald · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“A total of 136 genes were predicted, including 113 unique genes consisting of 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes.”

✓ located verbatim in the source · abstract, characters 506–641 · show in text ↑
t0

“Musa banksii”

✓ located verbatim in the source · title, characters 40–52 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The genome has 79 protein-coding genes.

Taxon
Musa banksiiMusa banksiit0
Outcome
protein-coding genese0
Value
79 protein-coding genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa banksii
Musa banksii · TaxonSteve Fitzgerald · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“79 protein-coding genes”

✓ located verbatim in the source · abstract, characters 584–607 · show in text ↑
t0

“Musa banksii”

✓ located verbatim in the source · title, characters 40–52 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The genome has 30 tRNA genes.

Taxon
Musa banksiiMusa banksiit0
Outcome
tRNA genese0
Value
30 tRNA genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa banksii
Musa banksii · TaxonSteve Fitzgerald · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“30 tRNA genes”

✓ located verbatim in the source · abstract, characters 609–622 · show in text ↑
t0

“Musa banksii”

✓ located verbatim in the source · title, characters 40–52 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The genome has 4 rRNA genes.

Taxon
Musa banksiiMusa banksiit0
Outcome
rRNA genese0
Value
4 rRNA genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa banksii
Musa banksii · TaxonSteve Fitzgerald · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“4 rRNA genes”

✓ located verbatim in the source · abstract, characters 628–640 · show in text ↑
t0

“Musa banksii”

✓ located verbatim in the source · title, characters 40–52 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Musa banksii is closely related to Musa ornata and Musa acuminata.

Taxon
Musa banksiiMusa banksiit0
Outcome
closely related to the Musa ornata and Musa acuminatae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Musa banksii
Musa banksii · TaxonSteve Fitzgerald · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“M. banksii closely related to the Musa ornata and Musa acuminata.”

✓ located verbatim in the source · abstract, characters 758–823 · show in text ↑
t0

“Musa banksii”

✓ located verbatim in the source · title, characters 40–52 · show in text ↑