Paper · 2019 · Russian Journal of Genetics

On the Issue of Larix × lubarskii Sukaczev Origin: Analysis of Polymorphism of Mitochondrial Genome Markers

E. A. Vasyutkina; I. Yu. Adrianova

7
claims
12
verbatim quotes
0
citations
2
research areas
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Not open access

Abstract

Abstract The genetic diversity of Larix × lubarskii Sukaczev and its genetic relationships to other larches from the south of Primorsky krai and Far Eastern and Siberian Larix species were for the first time studied according to the analysis of the UBC460 mitochondrial origin fragment length polymorphism and nucleotide sequences of the 5'-flanking region of the atpA gene and nad4(3c–4r) region in mitochondrial DNA. Two length variants of the UBC460 fragment were detected in the L. × lubarskii population (with a predominance of the short one). This taxon is characterized by an average haplotype (0.582) and low nucleotide (0.0003) diversity. The comparative analysis of nucleotide polymorphism of two mtDNA regions in larches from the south of Primorsky krai revealed three mitotypes in L. × lubarskii; only one of them was common with L. olgensis A. Henry (locus classicus). The network of mitotype genealogical relationships indicates a common origin of L. × lubarskii and L. olgensis and their relatively recent divergence, as well as a closer relationship to L. sibirica Ledeb. than to L. gmelinii (Rupr.) Rupr.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

Two UBC460 length variants were detected, with the short variant predominant.

Taxon
Larix × lubarskiit0
Material
L. × lubarskii populatione0
Gene
UBC460e0
Outcome
Two length variantse0
Qualifier
a predominance of the short onee0

Verbatim

e0

“Two length variants of the UBC460 fragment were detected in the L. × lubarskii population (with a predominance of the short one)”

✓ located verbatim in the source · abstract, characters 419–547 · show in text ↑
t0

“Larix × lubarskii”

✓ located verbatim in the source · title, characters 16–33 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Haplotype diversity was 0.582.

Taxon
Larix × lubarskiit0
Outcome
haplotypee0
Value
0.582e0

Verbatim

e0

“This taxon is characterized by an average haplotype (0.582) and low nucleotide (0.0003) diversity”

✓ located verbatim in the source · abstract, characters 549–646 · show in text ↑
t0

“Larix × lubarskii”

✓ located verbatim in the source · title, characters 16–33 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Nucleotide diversity was low at 0.0003.

Taxon
Larix × lubarskiit0
Outcome
nucleotidee0
Direction
lowe0
Value
0.0003e0

Verbatim

e0

“This taxon is characterized by an average haplotype (0.582) and low nucleotide (0.0003) diversity”

✓ located verbatim in the source · abstract, characters 549–646 · show in text ↑
t0

“Larix × lubarskii”

✓ located verbatim in the source · title, characters 16–33 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Only one mitotype was shared with L. olgensis.

Taxon
Larix × lubarskiit0
Outcome
only one of them was commone0
Value
onee0
Comparator
L. olgensis A. Henrye0

Verbatim

e0

“only one of them was common with L. olgensis A. Henry (locus classicus)”

✓ located verbatim in the source · abstract, characters 809–880 · show in text ↑
t0

“Larix × lubarskii”

✓ located verbatim in the source · title, characters 16–33 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Mitotype genealogy indicated common origin and recent divergence of L. × lubarskii and L. olgensis.

Taxon
L. × lubarskiie0
Outcome
a common origine0
Qualifier
relatively recent divergencee0
Comparator
L. olgensise0

Verbatim

e0

“indicates a common origin of L. × lubarskii and L. olgensis and their relatively recent divergence”

✓ located verbatim in the source · abstract, characters 933–1031 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

L. × lubarskii was closer to L. sibirica than L. gmelinii.

Taxon
Larix × lubarskiit0
Outcome
relationship to L. sibirica Ledeb.e0
Direction
closere0
Comparator
L. gmelinii (Rupr.) Rupr.e0

Verbatim

e0

“a closer relationship to L. sibirica Ledeb. than to L. gmelinii (Rupr.) Rupr.”

✓ located verbatim in the source · abstract, characters 1044–1121 · show in text ↑
t0

“Larix × lubarskii”

✓ located verbatim in the source · title, characters 16–33 · show in text ↑