Paper · 2019 · Phytopathology

Unraveling the Complexity of Coffee Leaf Rust Behavior and Development in Different Coffea arabica Agroecosystems

Isabelle Merle; Jimmy Pico; Eduardo Granados; et al.

6
claims
17
verbatim quotes
28
citations
3
research areas
✓
Open access

Abstract

Crop health management systems can be designed according to practices that help to reduce crop losses by restricting pathogen development and promoting host plant growth. A good understanding of pathogen and host dynamics, which are interdependent, is therefore needed. In this article, we used a holistic approach to explain the behavior of coffee leaf rust (CLR), a major coffee disease. We monitored coffee plant and CLR dynamics simultaneously in plots under different disease management and agroforestry systems. Diseased leaves were also collected to characterize inoculum stock and rust life stages (latent rust area, area with uredospores, necrosis due to rust) through picture analysis. We used structural equation modeling to obtain an overview of CLR pathosystem functioning on a plant scale. This overview integrates processes such as disease dilution by host leaf renewal, direct and indirect effects of fruit load on CLR development, antagonistic effects of shading depending on rust life stages, the tonic effect of copper-based fungicides on leaf retention, and effects on rust life stages depending on fungicide types. From our results, we also deduced that the inoculum stock could be calculated in unsprayed plots from the rust area with uredospores, with uredospores at 58 × 10 3 cm −2 , on average.

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Claims 6

Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Host leaf renewal dilutes coffee leaf rust, decreasing rust intensity on Coffea arabica.

Taxon
Coffea arabicaCoffea arabicat0
Treatment
host leaf renewale1
Interactor
coffee leaf ruste0pathogen
Outcome
disease dilutione1
Direction
decreaseinferrede1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea arabica
Coffea arabica · TaxonMarcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Coffea arabica”

✓ located verbatim in the source · title, characters 84–98 · show in text ↑
e0

“coffee leaf rust (CLR), a major coffee disease”

✓ located verbatim in the source · abstract, characters 342–388 · show in text ↑
e1

“disease dilution by host leaf renewal”

✓ located verbatim in the source · abstract, characters 847–884 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Copper-based fungicides had a tonic effect that increased leaf retention in Coffea arabica.

Taxon
Coffea arabicaCoffea arabicat0
Treatment
copper-based fungicidese4
Outcome
leaf retentione4
Direction
increaseinferrede4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea arabica
Coffea arabica · TaxonMarcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Coffea arabica”

✓ located verbatim in the source · title, characters 84–98 · show in text ↑
e4

“the tonic effect of copper-based fungicides on leaf retention”

✓ located verbatim in the source · abstract, characters 1011–1072 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Shading had antagonistic effects on coffee leaf rust, decreasing rust development depending on rust life stage.

Taxon
Coffea arabicaCoffea arabicat0
Treatment
shadinge3
Interactor
coffee leaf ruste0pathogen
Outcome
rust life stagese3
Direction
decreaseinferrede3
Qualifier
depending on rust life stagese3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea arabica
Coffea arabica · TaxonMarcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Coffea arabica”

✓ located verbatim in the source · title, characters 84–98 · show in text ↑
e0

“coffee leaf rust (CLR), a major coffee disease”

✓ located verbatim in the source · abstract, characters 342–388 · show in text ↑
e3

“antagonistic effects of shading depending on rust life stages”

✓ located verbatim in the source · abstract, characters 948–1009 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Fruit load had direct and indirect effects on coffee leaf rust development in Coffea arabica.

Taxon
Coffea arabicaCoffea arabicat0
Treatment
fruit loade2
Interactor
coffee leaf ruste0pathogen
Outcome
CLR developmente2
Qualifier
direct and indirect effectse2

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea arabica
Coffea arabica · TaxonMarcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Coffea arabica”

✓ located verbatim in the source · title, characters 84–98 · show in text ↑
e0

“coffee leaf rust (CLR), a major coffee disease”

✓ located verbatim in the source · abstract, characters 342–388 · show in text ↑
e2

“direct and indirect effects of fruit load on CLR development”

✓ located verbatim in the source · abstract, characters 886–946 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Fungicide types had effects on coffee leaf rust life stages in Coffea arabica.

Taxon
Coffea arabicaCoffea arabicat0
Treatment
fungicide typese5
Interactor
coffee leaf ruste0pathogen
Outcome
rust life stagese5

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea arabica
Coffea arabica · TaxonMarcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Coffea arabica”

✓ located verbatim in the source · title, characters 84–98 · show in text ↑
e0

“coffee leaf rust (CLR), a major coffee disease”

✓ located verbatim in the source · abstract, characters 342–388 · show in text ↑
e5

“effects on rust life stages depending on fungicide types”

✓ located verbatim in the source · abstract, characters 1078–1134 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

In unsprayed Coffea arabica plots, coffee leaf rust inoculum can be estimated from the rust area with uredospores, averaging 58 × 10 3 cm −2 uredospores.

Taxon
Coffea arabicaCoffea arabicat0
Interactor
coffee leaf ruste0pathogen
Outcome
uredosporese6
Value
58 × 10 3 cm −2e6
Qualifier
on averagee6
Setting
unsprayed plotse6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea arabica
Coffea arabica · TaxonMarcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Coffea arabica”

✓ located verbatim in the source · title, characters 84–98 · show in text ↑
e6

“the inoculum stock could be calculated in unsprayed plots from the rust area with uredospores, with uredospores at 58 × 10 3 cm −2 , on average”

✓ located verbatim in the source · abstract, characters 1175–1318 · show in text ↑
e0

“coffee leaf rust (CLR), a major coffee disease”

✓ located verbatim in the source · abstract, characters 342–388 · show in text ↑