Paper · 2020 · Mitochondrial DNA Part B

The complete chloroplast genome and phylogenetic analysis of Gentiana manshurica Kitag from China

Yu Liang; Xiangxiao Meng; Zejing Mu; et al.

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verbatim quotes
4
citations
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Open access · cc-by

Abstract

Gentiana manshurica Kitag is a perennial medicinal plant with high economic value. In this study, we first reported the complete chloroplast (cp) genome of G. manshurica. The total length of the cp genome was 149,185 bp in length, consisting of a large single-copy (LSC) region of 81,347 bp, a small single-copy (SSC) region of 17,268 bp, and a pair of inverted repeats (IRs) regions of 25,285 bp each. The cp genome contained 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content was 37.61%. The phylogenetic analysis indicated that the G. manshurica belongs to the tribe Gentianeae, and showed a close relationship with other Gentiana species.

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Claims 12

Method / resourceobservedoriginal resultbasis n/a

Claim · model-written summary

The complete chloroplast genome was reported.

Taxon
G. manshuricaGentiana manshuricae0
Outcome
complete chloroplast (cp) genomee0

Not reportedComparatorValue

Verbatim

e0

“we first reported the complete chloroplast (cp) genome of G. manshurica”

✓ located verbatim in the source · abstract, characters 98–169 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The chloroplast genome length was 149,185 bp.

Taxon
G. manshuricaGentiana manshuricae1
Outcome
total length of the cp genomee0
Value
149,185 bpe0

Verbatim

e0

“The total length of the cp genome was 149,185 bp in length”

✓ located verbatim in the source · abstract, characters 171–229 · show in text ↑
e1

“we first reported the complete chloroplast (cp) genome of G. manshurica”

✓ located verbatim in the source · abstract, characters 98–169 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The LSC region was 81,347 bp.

Taxon
G. manshuricaGentiana manshuricae1
Outcome
large single-copy (LSC) regione0
Value
81,347 bpe0

Verbatim

e0

“a large single-copy (LSC) region of 81,347 bp”

✓ located verbatim in the source · abstract, characters 245–290 · show in text ↑
e1

“we first reported the complete chloroplast (cp) genome of G. manshurica”

✓ located verbatim in the source · abstract, characters 98–169 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The SSC region was 17,268 bp.

Taxon
G. manshuricaGentiana manshuricae1
Outcome
small single-copy (SSC) regione0
Value
17,268 bpe0

Verbatim

e0

“a small single-copy (SSC) region of 17,268 bp”

✓ located verbatim in the source · abstract, characters 292–337 · show in text ↑
e1

“we first reported the complete chloroplast (cp) genome of G. manshurica”

✓ located verbatim in the source · abstract, characters 98–169 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Each inverted repeat region was 25,285 bp.

Taxon
G. manshuricaGentiana manshuricae1
Outcome
inverted repeats (IRs) regionse0
Value
25,285 bpe0

Verbatim

e0

“a pair of inverted repeats (IRs) regions of 25,285 bp each”

✓ located verbatim in the source · abstract, characters 343–401 · show in text ↑
e1

“we first reported the complete chloroplast (cp) genome of G. manshurica”

✓ located verbatim in the source · abstract, characters 98–169 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The chloroplast genome contained 130 genes.

Taxon
G. manshuricaGentiana manshuricae1
Outcome
genese0
Value
130 genese0

Verbatim

e0

“The cp genome contained 130 genes”

✓ located verbatim in the source · abstract, characters 403–436 · show in text ↑
e1

“we first reported the complete chloroplast (cp) genome of G. manshurica”

✓ located verbatim in the source · abstract, characters 98–169 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The chloroplast genome contained 85 protein-coding genes.

Taxon
G. manshuricaGentiana manshuricae1
Outcome
protein-coding genese0
Value
85 protein-coding genese0

Verbatim

e0

“85 protein-coding genes”

✓ located verbatim in the source · abstract, characters 448–471 · show in text ↑
e1

“we first reported the complete chloroplast (cp) genome of G. manshurica”

✓ located verbatim in the source · abstract, characters 98–169 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The chloroplast genome contained 37 tRNA genes.

Taxon
G. manshuricaGentiana manshuricae1
Outcome
tRNA genese0
Value
37 tRNA genese0

Verbatim

e0

“37 tRNA genes”

✓ located verbatim in the source · abstract, characters 473–486 · show in text ↑
e1

“we first reported the complete chloroplast (cp) genome of G. manshurica”

✓ located verbatim in the source · abstract, characters 98–169 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The chloroplast genome contained 8 rRNA genes.

Taxon
G. manshuricaGentiana manshuricae1
Outcome
rRNA genese0
Value
8 rRNA genese0

Verbatim

e0

“8 rRNA genes”

✓ located verbatim in the source · abstract, characters 492–504 · show in text ↑
e1

“we first reported the complete chloroplast (cp) genome of G. manshurica”

✓ located verbatim in the source · abstract, characters 98–169 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Overall GC content was 37.61%.

Taxon
G. manshuricaGentiana manshuricae1
Outcome
overall GC contente0
Value
37.61%e0

Verbatim

e0

“The overall GC content was 37.61%”

✓ located verbatim in the source · abstract, characters 506–539 · show in text ↑
e1

“we first reported the complete chloroplast (cp) genome of G. manshurica”

✓ located verbatim in the source · abstract, characters 98–169 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phylogenetic analysis placed G. manshurica in tribe Gentianeae.

Taxon
G. manshuricaGentiana manshuricae0
Outcome
belongs to the tribe Gentianeaee0

Verbatim

e0

“the G. manshurica belongs to the tribe Gentianeae”

✓ located verbatim in the source · abstract, characters 582–631 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

G. manshurica was closely related to other Gentiana species.

Taxon
G. manshuricaGentiana manshuricae1
Outcome
close relationship with other Gentiana speciese0

Verbatim

e0

“showed a close relationship with other Gentiana species”

✓ located verbatim in the source · abstract, characters 637–692 · show in text ↑
e1

“we first reported the complete chloroplast (cp) genome of G. manshurica”

✓ located verbatim in the source · abstract, characters 98–169 · show in text ↑