Paper · 2020 · Remote Sensing

Closing the Phenotyping Gap: High Resolution UAV Time Series for Soybean Growth Analysis Provides Objective Data from Field Trials

Irene Borra-Serrano; Tom De Swaef; Paul Quataert; et al.

5
claims
10
verbatim quotes
69
citations
2
research areas
✓
Open access · cc-by

Abstract

Close remote sensing approaches can be used for high throughput on-field phenotyping in the context of plant breeding and biological research. Data on canopy cover (CC) and canopy height (CH) and their temporal changes throughout the growing season can yield information about crop growth and performance. In the present study, sigmoid models were fitted to multi-temporal CC and CH data obtained using RGB imagery captured with a drone for a broad set of soybean genotypes. The Gompertz and Beta functions were used to fit CC and CH data, respectively. Overall, 90.4% fits for CC and 99.4% fits for CH reached an adjusted R2 > 0.70, demonstrating good performance of the models chosen. Using these growth curves, parameters including maximum absolute growth rate, early vigor, maximum height, and senescence were calculated for a collection of soybean genotypes. This information was also used to estimate seed yield and maturity (R8 stage) (adjusted R2 = 0.51 and 0.82). Combinations of parameter values were tested to identify genotypes with interesting traits. An integrative approach of fitting a curve to a multi-temporal dataset resulted in biologically interpretable parameters that were informative for relevant traits.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 5

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Sigmoid fits to canopy cover reached adjusted R2 > 0.70 for 90.4% of soybean genotypes.

Taxon
soybeanGlycine maxe0
Material
soybean genotypese0
Outcome
adjusted R2e1
Value
90.4%e1
Qualifier
fits for CCe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“sigmoid models were fitted to multi-temporal CC and CH data obtained using RGB imagery captured with a drone for a broad set of soybean genotypes”

✓ located verbatim in the source · abstract, characters 328–473 · show in text ↑
e1

“Overall, 90.4% fits for CC and 99.4% fits for CH reached an adjusted R2 > 0.70”

✓ located verbatim in the source · abstract, characters 554–632 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Sigmoid fits to canopy height reached adjusted R2 > 0.70 for 99.4% of soybean genotypes.

Taxon
soybeanGlycine maxe0
Material
soybean genotypese0
Outcome
adjusted R2e1
Value
99.4%e1
Qualifier
fits for CHe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“sigmoid models were fitted to multi-temporal CC and CH data obtained using RGB imagery captured with a drone for a broad set of soybean genotypes”

✓ located verbatim in the source · abstract, characters 328–473 · show in text ↑
e1

“Overall, 90.4% fits for CC and 99.4% fits for CH reached an adjusted R2 > 0.70”

✓ located verbatim in the source · abstract, characters 554–632 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Growth-curve parameters estimated seed yield with adjusted R2 = 0.51.

Taxon
soybeanGlycine maxe0
Outcome
seed yielde2
Value
adjusted R2 = 0.51e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“sigmoid models were fitted to multi-temporal CC and CH data obtained using RGB imagery captured with a drone for a broad set of soybean genotypes”

✓ located verbatim in the source · abstract, characters 328–473 · show in text ↑
e2

“This information was also used to estimate seed yield and maturity (R8 stage) (adjusted R2 = 0.51 and 0.82)”

✓ located verbatim in the source · abstract, characters 864–971 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Growth-curve parameters estimated maturity (R8 stage) with adjusted R2 = 0.82.

Taxon
soybeanGlycine maxe0
Outcome
maturity (R8 stage)e2
Value
0.82e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“sigmoid models were fitted to multi-temporal CC and CH data obtained using RGB imagery captured with a drone for a broad set of soybean genotypes”

✓ located verbatim in the source · abstract, characters 328–473 · show in text ↑
e2

“This information was also used to estimate seed yield and maturity (R8 stage) (adjusted R2 = 0.51 and 0.82)”

✓ located verbatim in the source · abstract, characters 864–971 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Fitting a curve to the multi-temporal dataset gave biologically interpretable parameters informative for relevant traits.

Taxon
soybeanGlycine maxe0
Outcome
biologically interpretable parameterse3
Qualifier
informative for relevant traitse3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“sigmoid models were fitted to multi-temporal CC and CH data obtained using RGB imagery captured with a drone for a broad set of soybean genotypes”

✓ located verbatim in the source · abstract, characters 328–473 · show in text ↑
e3

“An integrative approach of fitting a curve to a multi-temporal dataset resulted in biologically interpretable parameters that were informative for relevant traits”

✓ located verbatim in the source · abstract, characters 1065–1227 · show in text ↑