Paper · 2020 · Frontiers in Plant Science

Proteomic Studies to Understand the Mechanisms of Peach Tissue Degradation by Monilinia laxa

Silvia Rodríguez-Pires; Paloma Melgarejo; Antonieta De Cal; et al.

15
claims
29
verbatim quotes
19
citations
3
research areas
✓
Open access · cc-by

Abstract

Monilinia laxa is a necrotrophic plant pathogen able to infect and produce substantial losses on stone fruit. Three different isolates of M. laxa were characterized according to their aggressiveness on nectarines. M. laxa 8L isolate was the most aggressive on fruit, 33L isolate displayed intermediated virulence level, and 5L was classified as a weak aggressive isolate. Nectarine colonization process by the weak isolate 5L was strongly delayed. nLC-MS/MS proteomic studies using in vitro peach cultures provided data on exoproteomes of the three isolates at equivalent stages of brown rot colonization; 3 days for 8L and 33L, and 7 days for 5L. A total of 181 proteins were identified from 8L exoproteome and 289 proteins from 33L at 3 dpi, and 206 proteins were identified in 5L exoproteome at 7 dpi. Although an elevated number of proteins lacked a predicted function, the vast majority of proteins belong to OG group “metabolism”, composed of categories such as "carbohydrate transport and metabolism" in 5L, and "energy production and conversion" most represented in 8L and 33L. Among identified proteins, 157 that carried a signal peptide were further examined and classified. Carbohydrate-active enzymes and peptidases were the main groups revealing different protein alternatives with the same function among isolates. Our data suggested a subset of secreted proteins as possible markers of differential virulence in more aggressive isolates, MlPG1 MlPME3, NEP-like, or endoglucanase proteins. A core-exoproteome among isolates independently of their virulence but time-dependent was also described. This core included several well-known virulence factors involved in host-tissue factors like cutinase, pectin lyases and acid proteases. The secretion patterns supported the assumption that M. laxa deploys an extensive repertoire of proteins to facilitate the host infection and colonization and provided information for further characterization of M. laxa pathogenesis.

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Claims 15

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Isolate 8L was the most aggressive on nectarine fruit.

Material
8L isolatee0
Interactor
M. laxaMonilinia laxae0pathogen
Outcome
most aggressive on fruite0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗
Monilinia laxa
Monilinia laxa · InteractorArthuc01 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“M. laxa 8L isolate was the most aggressive on fruit”

✓ located verbatim in the source · abstract, characters 214–265 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Isolate 33L had intermediate virulence on nectarine fruit.

Material
33L isolatee0
Outcome
intermediated virulence levele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“33L isolate displayed intermediated virulence level”

✓ located verbatim in the source · abstract, characters 267–318 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Isolate 5L was weakly aggressive on nectarine fruit.

Material
5Le0
Outcome
weak aggressive isolatee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“5L was classified as a weak aggressive isolate”

✓ located verbatim in the source · abstract, characters 324–370 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Nectarine colonization by isolate 5L was strongly delayed.

Material
5Le0
Outcome
Nectarine colonization processe0
Direction
strongly delayede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica var. nucipersica
Prunus persica var. nucipersica · Taxon · picture of the speciesAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“Nectarine colonization process by the weak isolate 5L was strongly delayed”

✓ located verbatim in the source · abstract, characters 372–446 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The 8L exoproteome contained 181 identified proteins at 3 dpi.

Material
8Le0
Outcome
proteins were identified from 8L exoproteomee0
Value
181 proteinse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“A total of 181 proteins were identified from 8L exoproteome”

✓ located verbatim in the source · abstract, characters 648–707 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The 33L exoproteome contained 289 identified proteins at 3 dpi.

Material
33Le0
Outcome
proteins from 33Le0
Value
289 proteinse0
Qualifier
3 dpie0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“289 proteins from 33L at 3 dpi”

✓ located verbatim in the source · abstract, characters 712–742 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The 5L exoproteome contained 206 identified proteins at 7 dpi.

Material
5Le0
Outcome
proteins were identified in 5L exoproteomee0
Value
206 proteinse0
Qualifier
7 dpie0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“206 proteins were identified in 5L exoproteome at 7 dpi”

✓ located verbatim in the source · abstract, characters 748–803 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Most identified exoproteins belonged to the metabolism OG group.

Outcome
vast majority of proteins belong to OG group “metabolism”e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“the vast majority of proteins belong to OG group “metabolism””

✓ located verbatim in the source · abstract, characters 874–935 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Carbohydrate transport and metabolism was represented in isolate 5L.

Material
5Le0
Outcome
"carbohydrate transport and metabolism"e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“"carbohydrate transport and metabolism" in 5L”

✓ located verbatim in the source · abstract, characters 968–1013 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Energy production and conversion was most represented in isolates 8L and 33L.

Material
8L and 33Le0
Outcome
"energy production and conversion" most representede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“"energy production and conversion" most represented in 8L and 33L”

✓ located verbatim in the source · abstract, characters 1019–1084 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Carbohydrate-active enzymes and peptidases showed different alternatives with the same function among isolates.

Gene
Carbohydrate-active enzymes and peptidasese0
Outcome
different protein alternatives with the same function among isolatese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“Carbohydrate-active enzymes and peptidases were the main groups revealing different protein alternatives with the same function among isolates”

✓ located verbatim in the source · abstract, characters 1185–1327 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Secreted MlPG1, MlPME3, NEP-like and endoglucanase proteins were proposed as markers of higher virulence.

Gene
MlPG1 MlPME3, NEP-like, or endoglucanase proteinse0
Outcome
differential virulence in more aggressive isolatese0
Qualifier
possible markerse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“Our data suggested a subset of secreted proteins as possible markers of differential virulence in more aggressive isolates, MlPG1 MlPME3, NEP-like, or endoglucanase proteins”

✓ located verbatim in the source · abstract, characters 1329–1502 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A time-dependent core exoproteome was shared among isolates regardless of virulence.

Outcome
core-exoproteome among isolatese0
Qualifier
independently of their virulence but time-dependente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“A core-exoproteome among isolates independently of their virulence but time-dependent was also described”

✓ located verbatim in the source · abstract, characters 1504–1608 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The core exoproteome included cutinase, pectin lyases and acid proteases.

Gene
cutinase, pectin lyases and acid proteasese0
Outcome
virulence factors involved in host-tissue factorse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“This core included several well-known virulence factors involved in host-tissue factors like cutinase, pectin lyases and acid proteases”

✓ located verbatim in the source · abstract, characters 1610–1745 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

Secretion patterns supported an extensive M. laxa protein repertoire facilitating host infection and colonization.

Interactor
M. laxaMonilinia laxae0pathogen
Outcome
host infection and colonizatione0
Qualifier
extensive repertoire of proteinse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗
Monilinia laxa
Monilinia laxa · InteractorArthuc01 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The secretion patterns supported the assumption that M. laxa deploys an extensive repertoire of proteins to facilitate the host infection and colonization”

✓ located verbatim in the source · abstract, characters 1747–1901 · show in text ↑
t0

“Peach Tissue”

✓ located verbatim in the source · title, characters 50–62 · show in text ↑