Paper · 2020 · International Journal of Pathogen Research

Model Selection in Describing Disease Progress Curve of Fusarium Wilt (Fusarium oxysporum F.SP. Sesami) Disease in Sesame Varieties

Assefa Abadi Kebede; Weres Negash Golla

7
claims
16
verbatim quotes
1
citations
3
research areas
✓
Open access

Abstract

An epidemic of disease is the progress of the disease in time and space. The objectives of the present study are to understand and compare the four nonlinear models for disease progress curves of five sesame varieties. The regression parameters estimation, standard error, R-square, Akaike Information Criterion (AIC) and Bayesian Information Criterion (BIC) were estimated. The lowest values of standard error and the highest values of R-square were calculated from the monomolecular model. Also, the result showed that; the disease progress curve better fitted within the monomolecular model for each varieties with the smallest AIC and BIC values. This model is appropriate for modelling epidemics where there is a monocycle within a growing season. The Monomolecular model allows the estimation of the disease progression rate and an area under the disease progress curve was carried out to know the level of reaction to the disease. The lowest rate of fusarium wilt disease was recorded from Hirhir followed by Setit-2. However, the highest value was recorded from Setit-3 followed by Setit-1. A highest value of area under disease progress curve (AUDPC) was calculated from Setit-3. However, the lowest was calculated from Hirhir. Varieties with low disease incidence could be useful in breeding programs aimed at developing varieties with higher resistance to Fusarium wilt disease.

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Claims 7

Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The monomolecular model had the lowest standard error and highest R-square.

Taxon
Sesame VarietiesSesamum indicumt0
Outcome
standard errore0
Direction
loweste0
Comparator
monomolecular modele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sesamum indicum
Sesamum indicum · TaxonFranz Xaver · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The lowest values of standard error and the highest values of R-square were calculated from the monomolecular model.”

✓ located verbatim in the source · abstract, characters 375–491 · show in text ↑
t0

“Sesame Varieties”

✓ located verbatim in the source · title, characters 115–131 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The monomolecular model fit disease progress best for each variety by AIC and BIC.

Taxon
Sesame VarietiesSesamum indicumt0
Interactor
Fusarium oxysporum F.SP. SesamiFusarium oxysporumt0pathogen
Outcome
disease progress curvee0
Direction
better fittede0
Comparator
monomolecular modele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sesamum indicum
Sesamum indicum · TaxonFranz Xaver · CC BY-SA 3.0 · Wikimedia Commons ↗
Fusarium oxysporum
Fusarium oxysporum · InteractorClemson University - USDA Cooperative Extension Slide Series · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the disease progress curve better fitted within the monomolecular model for each varieties with the smallest AIC and BIC values.”

✓ located verbatim in the source · abstract, characters 522–650 · show in text ↑
t0

“Fusarium oxysporum F.SP. Sesami) Disease in Sesame Varieties”

✓ located verbatim in the source · title, characters 71–131 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Hirhir had the lowest Fusarium wilt rate, followed by Setit-2.

Taxon
Sesame VarietiesSesamum indicumt0
Material
Hirhire0
Interactor
fusariumFusariume0pathogen
Outcome
rate of fusarium wilt diseasee0
Direction
loweste0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sesamum indicum
Sesamum indicum · TaxonFranz Xaver · CC BY-SA 3.0 · Wikimedia Commons ↗
Fusarium
Fusarium · Interactor · picture of the genus (one of its species)Public domain · Wikimedia Commons ↗

Verbatim

e0

“The lowest rate of fusarium wilt disease was recorded from Hirhir followed by Setit-2.”

✓ located verbatim in the source · abstract, characters 938–1024 · show in text ↑
t0

“Sesame Varieties”

✓ located verbatim in the source · title, characters 115–131 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Setit-3 had the highest Fusarium wilt rate, followed by Setit-1.

Taxon
Sesame VarietiesSesamum indicumt0
Material
Setit-3e0
Interactor
Fusarium oxysporum F.SP. SesamiFusarium oxysporumt0pathogen
Outcome
rate of fusarium wilt diseasee1
Direction
higheste0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sesamum indicum
Sesamum indicum · TaxonFranz Xaver · CC BY-SA 3.0 · Wikimedia Commons ↗
Fusarium oxysporum
Fusarium oxysporum · InteractorClemson University - USDA Cooperative Extension Slide Series · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the highest value was recorded from Setit-3 followed by Setit-1.”

✓ located verbatim in the source · abstract, characters 1034–1098 · show in text ↑
e1

“rate of fusarium wilt disease was recorded from Hirhir”

✓ located verbatim in the source · abstract, characters 949–1003 · show in text ↑
t0

“Fusarium oxysporum F.SP. Sesami) Disease in Sesame Varieties”

✓ located verbatim in the source · title, characters 71–131 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Setit-3 had the highest AUDPC.

Taxon
Sesame VarietiesSesamum indicumt0
Material
Setit-3e0
Interactor
Fusarium oxysporum F.SP. SesamiFusarium oxysporumt0pathogen
Outcome
area under disease progress curve (AUDPC)e0
Direction
higheste0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sesamum indicum
Sesamum indicum · TaxonFranz Xaver · CC BY-SA 3.0 · Wikimedia Commons ↗
Fusarium oxysporum
Fusarium oxysporum · InteractorClemson University - USDA Cooperative Extension Slide Series · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A highest value of area under disease progress curve (AUDPC) was calculated from Setit-3.”

✓ located verbatim in the source · abstract, characters 1099–1188 · show in text ↑
t0

“Fusarium oxysporum F.SP. Sesami) Disease in Sesame Varieties”

✓ located verbatim in the source · title, characters 71–131 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Hirhir had the lowest AUDPC.

Taxon
Sesame VarietiesSesamum indicumt0
Material
Hirhire0
Interactor
Fusarium oxysporum F.SP. SesamiFusarium oxysporumt0pathogen
Outcome
area under disease progress curve (AUDPC)e1
Direction
loweste0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sesamum indicum
Sesamum indicum · TaxonFranz Xaver · CC BY-SA 3.0 · Wikimedia Commons ↗
Fusarium oxysporum
Fusarium oxysporum · InteractorClemson University - USDA Cooperative Extension Slide Series · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the lowest was calculated from Hirhir.”

✓ located verbatim in the source · abstract, characters 1198–1236 · show in text ↑
e1

“area under disease progress curve (AUDPC) was calculated from Setit-3.”

✓ located verbatim in the source · abstract, characters 1118–1188 · show in text ↑
t0

“Fusarium oxysporum F.SP. Sesami) Disease in Sesame Varieties”

✓ located verbatim in the source · title, characters 71–131 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

Low incidence varieties could support breeding for Fusarium wilt resistance.

Taxon
Sesame VarietiesSesamum indicumt0
Interactor
FusariumFusariume0pathogen
Outcome
useful in breeding programse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Sesamum indicum
Sesamum indicum · TaxonFranz Xaver · CC BY-SA 3.0 · Wikimedia Commons ↗
Fusarium
Fusarium · Interactor · picture of the genus (one of its species)Public domain · Wikimedia Commons ↗

Verbatim

e0

“Varieties with low disease incidence could be useful in breeding programs aimed at developing varieties with higher resistance to Fusarium wilt disease.”

✓ located verbatim in the source · abstract, characters 1237–1389 · show in text ↑
t0

“Sesame Varieties”

✓ located verbatim in the source · title, characters 115–131 · show in text ↑