Paper · 2020 · AoB Plants

Population genomics reveal apomixis in a novel system: uniclonal female populations dominate the tropical forest herb family, Hanguanaceae (Commelinales)

Matti A Niissalo; Jana Leong-Škorničková; Otakar Šída; et al.

8
claims
14
verbatim quotes
13
citations
2
research areas
✓
Open access · cc-by

Abstract

Abstract The abundance of apomixis in tropical plant genera is poorly understood, and this affects the understanding of speciation and evolution. Hanguanaceae is a tropical monogeneric, dioecious plant family. All but two species are solitary herbs with no capability to spread vegetatively. Viable seeds are often produced when males have not been observed. Our aim was to investigate the presence of apomixis in Hanguana. We used reduced representation genomics to study phylogenetics and genetic variability in all populations of Hanguana in Singapore. We measured genome sizes and estimated ploidy levels in 10 species. Almost all taxa tested were genetically uniform (uniclonal) regardless of the extent of their distribution. The distribution of single clones over distinct localities supports our hypothesis of apomictic reproduction. Only one sexually reproducing native species was detected. Triploid and pentaploid states support our hypothesis that the type of apomixis in Hanguana is gametophytic. Population genomics tools offer a quick and cost-effective way of detecting excess clonality and thereby inferring apomixis. In the case of Hanguana, the presence of male plants is a strong indicator of sexual reproduction, whereas genome triplication is indicative of apomictic reproduction.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

Almost all Hanguana taxa tested were genetically uniform (uniclonal).

Taxon
HanguanaHanguanae1
Outcome
genetically uniform (uniclonal)e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hanguana
Hanguana · TaxonDenis Barthel · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Our aim was to investigate the presence of apomixis in Hanguana”

✓ located verbatim in the source · abstract, characters 359–422 · show in text ↑
e2

“Almost all taxa tested were genetically uniform (uniclonal) regardless of the extent of their distribution”

✓ located verbatim in the source · abstract, characters 624–730 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The distribution of single clones over distinct localities supports the hypothesis of apomictic reproduction in Hanguana.

Taxon
HanguanaHanguanae1
Outcome
apomictic reproductione2
Qualifier
distribution of single clones over distinct localitiese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hanguana
Hanguana · TaxonDenis Barthel · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Our aim was to investigate the presence of apomixis in Hanguana”

✓ located verbatim in the source · abstract, characters 359–422 · show in text ↑
e2

“The distribution of single clones over distinct localities supports our hypothesis of apomictic reproduction”

✓ located verbatim in the source · abstract, characters 732–840 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Only one sexually reproducing native Hanguana species was detected.

Taxon
HanguanaHanguanae1
Outcome
sexually reproducing native speciese2
Value
onee2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hanguana
Hanguana · TaxonDenis Barthel · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Our aim was to investigate the presence of apomixis in Hanguana”

✓ located verbatim in the source · abstract, characters 359–422 · show in text ↑
e2

“Only one sexually reproducing native species was detected”

✓ located verbatim in the source · abstract, characters 842–899 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Hanguana plants were triploid and pentaploid.

Taxon
HanguanaHanguanae1
Outcome
Triploid and pentaploid statese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hanguana
Hanguana · TaxonDenis Barthel · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Our aim was to investigate the presence of apomixis in Hanguana”

✓ located verbatim in the source · abstract, characters 359–422 · show in text ↑
e2

“Triploid and pentaploid states support our hypothesis that the type of apomixis in Hanguana is gametophytic”

✓ located verbatim in the source · abstract, characters 901–1008 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The type of apomixis in Hanguana is suggested to be gametophytic.

Taxon
HanguanaHanguanae1
Outcome
type of apomixise1
Qualifier
gametophytice1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hanguana
Hanguana · TaxonDenis Barthel · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Triploid and pentaploid states support our hypothesis that the type of apomixis in Hanguana is gametophytic”

✓ located verbatim in the source · abstract, characters 901–1008 · show in text ↑
Associationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The presence of male plants is a strong indicator of sexual reproduction in Hanguana.

Taxon
HanguanaHanguanae1
Material
male plantse1
Outcome
sexual reproductione1

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hanguana
Hanguana · TaxonDenis Barthel · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“In the case of Hanguana, the presence of male plants is a strong indicator of sexual reproduction”

✓ located verbatim in the source · abstract, characters 1135–1232 · show in text ↑
Observationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Genome triplication is indicative of apomictic reproduction in Hanguana.

Taxon
HanguanaHanguanae1
Outcome
genome triplicatione2
Qualifier
indicative of apomictic reproductione2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hanguana
Hanguana · TaxonDenis Barthel · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Our aim was to investigate the presence of apomixis in Hanguana”

✓ located verbatim in the source · abstract, characters 359–422 · show in text ↑
e2

“whereas genome triplication is indicative of apomictic reproduction”

✓ located verbatim in the source · abstract, characters 1234–1301 · show in text ↑
Observationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Population genomics tools offer a quick and cost-effective way of detecting excess clonality to infer apomixis.

Taxon
HanguanaHanguanae1
Outcome
detecting excess clonalitye2
Qualifier
quick and cost-effectivee2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hanguana
Hanguana · TaxonDenis Barthel · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Our aim was to investigate the presence of apomixis in Hanguana”

✓ located verbatim in the source · abstract, characters 359–422 · show in text ↑
e2

“Population genomics tools offer a quick and cost-effective way of detecting excess clonality and thereby inferring apomixis”

✓ located verbatim in the source · abstract, characters 1010–1133 · show in text ↑