Paper · 2021 · Agronomy Journal

Statistical models of yield in on‐farm precision experimentation

P. Paccioretti; C. Bruno; F. Gianinni Kurina; et al.

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Open access · cc-by-nc-sa

Abstract

Abstract On‐farm precision experimentation (OFPE) is increasingly conducted using variable‐rate technology and precision agriculture (PA) equipment to measure the effect of changes in input application rates on yields and profits at specific fields. Classical linear regression models and new Bayesian and machine learning regressions for spatial data can be used to investigate site‐specific crop response from georeferenced data. The objective of this work was to compare statistical models that can be used by researchers analyzing OFPE data to estimate crop response and better describe its spatial within‐field variability. Three statistical models estimating the responses to N rates, seed rates, and site‐specific soil properties from eight OFPEs were compared: (a) linear regression (LR) for spatially correlated errors, (b) Bayesian regression (BR) with random site effects, and (c) random forest regression (RF) with kriged residuals. Models were adjusted to account for spatial variation in yield response, and with and without field characteristic covariates. Modeling spatial correlation and including plot covariates improved yield predictions. Differences among methods proved to be indistinguishable with respect to average explained variance, correlation between predicted and observed values, and mean square prediction errors (PEs). However, BR and RF outperformed LR in site‐specific prediction accuracy, with BR predictions having lower predictive uncertainty than RF predictions. The hierarchical Bayesian model for spatial data is a useful tool to process OFPE data, allowing direct derivation of linear coefficients and prediction uncertainty measures related to site‐specific yield responses.

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Claims 5

Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Spatial correlation modeling and plot covariates improved yield predictions.

Treatment
Modeling spatial correlation and including plot covariatese0
Outcome
yield predictionse0
Direction
improvede0

Not reportedTaxonComparatorValue

Verbatim

e0

“Modeling spatial correlation and including plot covariates improved yield predictions.”

✓ located verbatim in the source · abstract, characters 1072–1158 · show in text ↑
Method / resourceobservedoriginal resultno effectmeasured

Claim · model-written summary

The methods were indistinguishable in average explained variance, predicted–observed correlation and mean square prediction errors.

Outcome
average explained variance, correlation between predicted and observed values, and mean square prediction errors (PEs)e0
Direction
indistinguishablee0
Comparator
methodse0

Verbatim

e0

“Differences among methods proved to be indistinguishable with respect to average explained variance, correlation between predicted and observed values, and mean square prediction errors (PEs).”

✓ located verbatim in the source · abstract, characters 1159–1351 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

BR and RF exceeded LR in site-specific prediction accuracy.

Outcome
site‐specific prediction accuracye0
Direction
outperformede0
Comparator
LRe0

Verbatim

e0

“BR and RF outperformed LR in site‐specific prediction accuracy”

✓ located verbatim in the source · abstract, characters 1361–1423 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

BR predictions had lower predictive uncertainty than RF predictions.

Outcome
predictive uncertaintye0
Direction
lowere0
Comparator
RF predictionse0

Verbatim

e0

“BR predictions having lower predictive uncertainty than RF predictions”

✓ located verbatim in the source · abstract, characters 1430–1500 · show in text ↑
Method / resourceauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The hierarchical Bayesian model permits direct derivation of linear coefficients and uncertainty measures for site-specific yield response.

Outcome
linear coefficients and prediction uncertainty measures related to site‐specific yield responsese0
Comparator
OFPE datae0

Not reportedValue

Verbatim

e0

“The hierarchical Bayesian model for spatial data is a useful tool to process OFPE data, allowing direct derivation of linear coefficients and prediction uncertainty measures related to site‐specific yield responses.”

✓ located verbatim in the source · abstract, characters 1502–1717 · show in text ↑