Paper · 2021 · Türk Tarım ve Doğa Bilimleri Dergisi

Molecular Phylogeny of Some Geophytes Taxa from Turkey; Systematic Approaches

Alparslan KOÇAK; Gülden KOÇAK; İlyas DENİZ

9
claims
9
verbatim quotes
1
citations
1
research areas
✓
Open access

Abstract

To determine the evolutionary relationships among some members of geophytes collected from their natural habitat in Kulp-Diyarbakır we carried out molecular phylogenetic analysis of one nuclear DNA (nrDNA) region (internal transcribed spacer, ITS) and one chloroplast DNA (cpDNA) region (intergenic spacer region of trnL-F). Despite phylogenetic analysis using maximum likelihood done by two different DNA source show some differences it was identified that monocotyl petaloid taxa differ from dicotyledone geophyte ones. Also both phylogenetic trees reveal that Serapias, Anacamptis, Cephalanthera, Himanthoglossum and Dactylorhiza are nested in Orchis. Therefore the infraspecific relationships of these genera should be re-evaluated according to our molecular phylogenetic study results. Dicotyl geophyts show molecular phylogeny in accordance with the classical systematic order in Flora of Turkey and reveal the accuracy of interspecific and infraspecific distinctions of these taxa.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

Monocotyledonous petaloid geophyte taxa differ phylogenetically from dicotyledonous geophytes.

Taxon
monocotyl petaloid taxae2
Outcome
differ from dicotyledone geophyte onese2
Comparator
dicotyledone geophyte onese2

Verbatim

e2

“it was identified that monocotyl petaloid taxa differ from dicotyledone geophyte ones”

✓ located verbatim in the source · abstract, characters 435–520 · show in text ↑
Observationobservedoriginal resultbasis n/a

Claim · model-written summary

Serapias is nested in Orchis in both phylogenetic trees.

Taxon
SerapiasSerapiase3
Outcome
nested in Orchise3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Serapias
Serapias · Taxon · picture of the genus (one of its species)No machine-readable author provided. Kork~commonswiki assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e3

“Also both phylogenetic trees reveal that Serapias, Anacamptis, Cephalanthera, Himanthoglossum and Dactylorhiza are nested in Orchis”

✓ located verbatim in the source · abstract, characters 522–653 · show in text ↑
Observationobservedoriginal resultbasis n/a

Claim · model-written summary

Anacamptis is nested in Orchis in both phylogenetic trees.

Taxon
AnacamptisAnacamptise3
Outcome
nested in Orchise3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Anacamptis
Anacamptis · TaxonHans Hillewaert · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e3

“Also both phylogenetic trees reveal that Serapias, Anacamptis, Cephalanthera, Himanthoglossum and Dactylorhiza are nested in Orchis”

✓ located verbatim in the source · abstract, characters 522–653 · show in text ↑
Observationobservedoriginal resultbasis n/a

Claim · model-written summary

Cephalanthera is nested in Orchis in both phylogenetic trees.

Taxon
CephalantheraCephalantherae3
Outcome
nested in Orchise3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cephalanthera
Cephalanthera · Taxon · picture of the genus (one of its species)Bernd Haynold · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e3

“Also both phylogenetic trees reveal that Serapias, Anacamptis, Cephalanthera, Himanthoglossum and Dactylorhiza are nested in Orchis”

✓ located verbatim in the source · abstract, characters 522–653 · show in text ↑
Observationobservedoriginal resultbasis n/a

Claim · model-written summary

Himanthoglossum is nested in Orchis in both phylogenetic trees.

Taxon
Himanthoglossume3
Outcome
nested in Orchise3

Verbatim

e3

“Also both phylogenetic trees reveal that Serapias, Anacamptis, Cephalanthera, Himanthoglossum and Dactylorhiza are nested in Orchis”

✓ located verbatim in the source · abstract, characters 522–653 · show in text ↑
Observationobservedoriginal resultbasis n/a

Claim · model-written summary

Dactylorhiza is nested in Orchis in both phylogenetic trees.

Taxon
DactylorhizaDactylorhizae3
Outcome
nested in Orchise3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Dactylorhiza
Dactylorhiza · Taxon · picture of the genus (one of its species)Uoaei1 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“Also both phylogenetic trees reveal that Serapias, Anacamptis, Cephalanthera, Himanthoglossum and Dactylorhiza are nested in Orchis”

✓ located verbatim in the source · abstract, characters 522–653 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The infraspecific relationships of these genera should be re-evaluated in light of the molecular phylogeny.

Taxon
these generae4
Outcome
infraspecific relationshipse4

Verbatim

e4

“Therefore the infraspecific relationships of these genera should be re-evaluated according to our molecular phylogenetic study results”

✓ located verbatim in the source · abstract, characters 655–789 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Dicotyledonous geophytes show molecular phylogeny in accordance with the classical systematic order in Flora of Turkey.

Taxon
Dicotyl geophytse5
Outcome
molecular phylogenye5
Qualifier
in accordance with the classical systematic order in Flora of Turkeye5

Verbatim

e5

“Dicotyl geophyts show molecular phylogeny in accordance with the classical systematic order in Flora of Turkey and reveal the accuracy of interspecific and infraspecific distinctions of these taxa”

✓ located verbatim in the source · abstract, characters 791–987 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The molecular phylogeny reveals the accuracy of interspecific and infraspecific distinctions of dicotyledonous geophyte taxa.

Taxon
Dicotyl geophytse5
Outcome
accuracy of interspecific and infraspecific distinctionse5

Verbatim

e5

“Dicotyl geophyts show molecular phylogeny in accordance with the classical systematic order in Flora of Turkey and reveal the accuracy of interspecific and infraspecific distinctions of these taxa”

✓ located verbatim in the source · abstract, characters 791–987 · show in text ↑