Paper · 2021 · Agriculture

Diversity and Pathogenicity of Diaporthe Species Revealed from a Survey of Blueberry Orchards in Portugal

Sandra Hilário; Liliana Santos; Artur Alves

17
claims
27
verbatim quotes
21
citations
3
research areas
✓
Open access · cc-by

Abstract

Blueberries (Vaccinium corymbosum) are widely cultivated worldwide and largely consumed due to their known antioxidant and medicinal properties. Although Diaporthe species have been documented in Portugal as causal agents of blueberry twig blight and dieback, there is still scarce information on the species that cause these symptoms. Moreover, Diaporthe vaccinii, recently synonymized with D. eres, has been considered a concern to blueberry production worldwide. However, the current knowledge about its impact on blueberries remains unclear. The diversity of Diaporthe species associated with diseased blueberry plants were assessed through a national survey. A multilocus sequence analysis of the rDNA internal transcribed spacer (ITS) region, the translation elongation factor 1-alpha (tef1-α), β-tubulin (tub2), calmodulin (cal) and histone 3 (his3) genes unveiled the presence of Diaporthe ambigua, D. amygdali, D. crousii, D. foeniculina, D. hybrida, D. leucospermi, D. malorum and D. rudis. Moreover, all species were fully characterized based on a detailed morphological description. Diaporthe amygdali, D. hybrida, D. leucospermi and D. malorum are reported for the first time on diseased blueberries in Portugal. Results show that D. eres exhibited a high level of intraspecific variability within isolates, given that the strain CBS 160.32 might be a minor pathogen on blueberry plants, whereas CAA829 was revealed to be the most aggressive. Overall, this study also demonstrates that Diaporthe amygdali and D. eres may be two of the most aggressive species to blueberry plants. This study improves our understanding of the Diaporthe species and it’s causing of dieback and twig blight on Portuguese blueberry orchards. Additionally, the identification of these pathogens represents crucial information for blueberry producers to apply appropriate phytosanitary measures, as well as offering new insights into the potential pathogenicity of D. eres on this host.

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Claims 17

Observationobservedoriginal resultmeasured

Claim · model-written summary

Diaporthe ambigua was found on diseased blueberry plants.

Taxon
Blueberryt0
Interactor
Diaporthe ambiguaDiaporthe ambiguae0pathogen
Outcome
presence of Diaporthee0

Verbatim

e0

“A multilocus sequence analysis of the rDNA internal transcribed spacer (ITS) region, the translation elongation factor 1-alpha (tef1-α), β-tubulin (tub2), calmodulin (cal) and histone 3 (his3) genes unveiled the presence of Diaporthe ambigua, D. amygdali, D. crousii, D. foeniculina, D. hybrida, D. leucospermi, D. malorum and D. rudis”

✓ located verbatim in the source · abstract, characters 664–999 · show in text ↑
t0

“Blueberry Orchards”

✓ located verbatim in the source · title, characters 75–93 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

D. amygdali was found on diseased blueberry plants.

Taxon
Blueberryt0
Interactor
D. amygdaliDiaporthe amygdalie0pathogen
Outcome
presence of Diaporthee0

Verbatim

e0

“A multilocus sequence analysis of the rDNA internal transcribed spacer (ITS) region, the translation elongation factor 1-alpha (tef1-α), β-tubulin (tub2), calmodulin (cal) and histone 3 (his3) genes unveiled the presence of Diaporthe ambigua, D. amygdali, D. crousii, D. foeniculina, D. hybrida, D. leucospermi, D. malorum and D. rudis”

✓ located verbatim in the source · abstract, characters 664–999 · show in text ↑
t0

“Blueberry Orchards”

✓ located verbatim in the source · title, characters 75–93 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

D. crousii was found on diseased blueberry plants.

Taxon
Blueberryt0
Interactor
D. crousiiDiaporthe crousiie0pathogen
Outcome
presence of Diaporthee0

Verbatim

e0

“A multilocus sequence analysis of the rDNA internal transcribed spacer (ITS) region, the translation elongation factor 1-alpha (tef1-α), β-tubulin (tub2), calmodulin (cal) and histone 3 (his3) genes unveiled the presence of Diaporthe ambigua, D. amygdali, D. crousii, D. foeniculina, D. hybrida, D. leucospermi, D. malorum and D. rudis”

✓ located verbatim in the source · abstract, characters 664–999 · show in text ↑
t0

“Blueberry Orchards”

✓ located verbatim in the source · title, characters 75–93 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

D. foeniculina was found on diseased blueberry plants.

Taxon
Blueberryt0
Interactor
D. foeniculinaDiaporthe foeniculinae0pathogen
Outcome
presence of Diaporthee0

Verbatim

e0

“A multilocus sequence analysis of the rDNA internal transcribed spacer (ITS) region, the translation elongation factor 1-alpha (tef1-α), β-tubulin (tub2), calmodulin (cal) and histone 3 (his3) genes unveiled the presence of Diaporthe ambigua, D. amygdali, D. crousii, D. foeniculina, D. hybrida, D. leucospermi, D. malorum and D. rudis”

✓ located verbatim in the source · abstract, characters 664–999 · show in text ↑
t0

“Blueberry Orchards”

✓ located verbatim in the source · title, characters 75–93 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

D. hybrida was found on diseased blueberry plants.

Taxon
Blueberryt0
Interactor
D. hybridae0pathogen
Outcome
presence of Diaporthee0

Verbatim

e0

“A multilocus sequence analysis of the rDNA internal transcribed spacer (ITS) region, the translation elongation factor 1-alpha (tef1-α), β-tubulin (tub2), calmodulin (cal) and histone 3 (his3) genes unveiled the presence of Diaporthe ambigua, D. amygdali, D. crousii, D. foeniculina, D. hybrida, D. leucospermi, D. malorum and D. rudis”

✓ located verbatim in the source · abstract, characters 664–999 · show in text ↑
t0

“Blueberry Orchards”

✓ located verbatim in the source · title, characters 75–93 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

D. leucospermi was found on diseased blueberry plants.

Taxon
Blueberryt0
Interactor
D. leucospermiDiaporthe leucospermie0pathogen
Outcome
presence of Diaporthee0

Verbatim

e0

“A multilocus sequence analysis of the rDNA internal transcribed spacer (ITS) region, the translation elongation factor 1-alpha (tef1-α), β-tubulin (tub2), calmodulin (cal) and histone 3 (his3) genes unveiled the presence of Diaporthe ambigua, D. amygdali, D. crousii, D. foeniculina, D. hybrida, D. leucospermi, D. malorum and D. rudis”

✓ located verbatim in the source · abstract, characters 664–999 · show in text ↑
t0

“Blueberry Orchards”

✓ located verbatim in the source · title, characters 75–93 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

D. malorum was found on diseased blueberry plants.

Taxon
Blueberryt0
Interactor
D. malorumDiaporthe malorume0pathogen
Outcome
presence of Diaporthee0

Verbatim

e0

“A multilocus sequence analysis of the rDNA internal transcribed spacer (ITS) region, the translation elongation factor 1-alpha (tef1-α), β-tubulin (tub2), calmodulin (cal) and histone 3 (his3) genes unveiled the presence of Diaporthe ambigua, D. amygdali, D. crousii, D. foeniculina, D. hybrida, D. leucospermi, D. malorum and D. rudis”

✓ located verbatim in the source · abstract, characters 664–999 · show in text ↑
t0

“Blueberry Orchards”

✓ located verbatim in the source · title, characters 75–93 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

D. rudis was found on diseased blueberry plants.

Taxon
Blueberryt0
Interactor
D. rudisDiaporthe rudise0pathogen
Outcome
presence of Diaporthee0

Verbatim

e0

“A multilocus sequence analysis of the rDNA internal transcribed spacer (ITS) region, the translation elongation factor 1-alpha (tef1-α), β-tubulin (tub2), calmodulin (cal) and histone 3 (his3) genes unveiled the presence of Diaporthe ambigua, D. amygdali, D. crousii, D. foeniculina, D. hybrida, D. leucospermi, D. malorum and D. rudis”

✓ located verbatim in the source · abstract, characters 664–999 · show in text ↑
t0

“Blueberry Orchards”

✓ located verbatim in the source · title, characters 75–93 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Diaporthe amygdali was first reported on diseased blueberries in Portugal.

Taxon
blueberriese0
Interactor
Diaporthe amygdaliDiaporthe amygdalie0pathogen
Outcome
reported for the first timee0
Setting
Portugale0

Verbatim

e0

“Diaporthe amygdali, D. hybrida, D. leucospermi and D. malorum are reported for the first time on diseased blueberries in Portugal”

✓ located verbatim in the source · abstract, characters 1095–1224 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

D. hybrida was first reported on diseased blueberries in Portugal.

Taxon
blueberriese0
Interactor
D. hybridae0pathogen
Outcome
reported for the first timee0
Setting
Portugale0

Verbatim

e0

“Diaporthe amygdali, D. hybrida, D. leucospermi and D. malorum are reported for the first time on diseased blueberries in Portugal”

✓ located verbatim in the source · abstract, characters 1095–1224 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

D. leucospermi was first reported on diseased blueberries in Portugal.

Taxon
blueberriese0
Interactor
D. leucospermiDiaporthe leucospermie0pathogen
Outcome
reported for the first timee0
Setting
Portugale0

Verbatim

e0

“Diaporthe amygdali, D. hybrida, D. leucospermi and D. malorum are reported for the first time on diseased blueberries in Portugal”

✓ located verbatim in the source · abstract, characters 1095–1224 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

D. malorum was first reported on diseased blueberries in Portugal.

Taxon
blueberriese0
Interactor
D. malorumDiaporthe malorume0pathogen
Outcome
reported for the first timee0
Setting
Portugale0

Verbatim

e0

“Diaporthe amygdali, D. hybrida, D. leucospermi and D. malorum are reported for the first time on diseased blueberries in Portugal”

✓ located verbatim in the source · abstract, characters 1095–1224 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

D. eres isolates showed high intraspecific variability.

Taxon
Blueberryt0
Interactor
D. eresDiaporthe erese0pathogen
Outcome
high level of intraspecific variabilitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Diaporthe eres
Diaporthe eres · InteractorJerry Cooper · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“D. eres exhibited a high level of intraspecific variability within isolates”

✓ located verbatim in the source · abstract, characters 1244–1319 · show in text ↑
t0

“Blueberry Orchards”

✓ located verbatim in the source · title, characters 75–93 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

CBS 160.32 may be a minor blueberry pathogen.

Taxon
blueberrye0
Material
CBS 160.32e0
Interactor
CBS 160.32e0pathogen
Outcome
minor pathogene0

Verbatim

e0

“the strain CBS 160.32 might be a minor pathogen on blueberry plants”

✓ located verbatim in the source · abstract, characters 1332–1399 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

CAA829 was the most aggressive isolate on blueberry.

Taxon
Blueberryt0
Material
CAA829e0
Interactor
CAA829e0pathogen
Outcome
most aggressivee0

Verbatim

e0

“whereas CAA829 was revealed to be the most aggressive”

✓ located verbatim in the source · abstract, characters 1401–1454 · show in text ↑
t0

“Blueberry Orchards”

✓ located verbatim in the source · title, characters 75–93 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Diaporthe amygdali may be among the most aggressive species on blueberry plants.

Taxon
blueberrye0
Interactor
Diaporthe amygdaliDiaporthe amygdalie0pathogen
Outcome
most aggressive speciese0

Verbatim

e0

“Diaporthe amygdali and D. eres may be two of the most aggressive species to blueberry plants”

✓ located verbatim in the source · abstract, characters 1499–1591 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

D. eres may be among the most aggressive species on blueberry plants.

Taxon
blueberrye0
Interactor
D. eresDiaporthe erese0pathogen
Outcome
most aggressive speciese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Diaporthe eres
Diaporthe eres · InteractorJerry Cooper · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“Diaporthe amygdali and D. eres may be two of the most aggressive species to blueberry plants”

✓ located verbatim in the source · abstract, characters 1499–1591 · show in text ↑