Paper · 2021 · Mitochondrial DNA Part B

The complete chloroplast genome sequence of Bambusa albolineata (bambusodae)

Zhiwen Deng; Qian Chen; Jun Wu; et al.

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verbatim quotes
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citations
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Open access · cc-by

Abstract

Bambusa albolineata (local name: Hua Zhu) is found in Zhejiang, Jiangxi, Fujian, Taiwan, and Guangdong provinces of China, and is often cultivated on low hills, flatlands, and along streams and rivers. Due to its long internodes and flexible material, it is used as timber wood in China. In the current research, the complete chloroplast (CP) genome of B. albolineata was sequenced and reported for the first time. The complete CP genome sequence was 139,326 bp, including a large single-copy (LSC) region of 82,862 bp, a small single-copy (SSC) region of 12,870 bp, and a pair of invert repeats (IR) regions of 21,798 bp. Besides, the plastid genome consisted of 129 genes; having 82 protein-coding genes, 39 tRNA genes, and eight rRNA genes. The overall GC content of the genome was 44.2%. The phylogenetic analysis based on the complete chloroplast genome indicates that B. albolineata is strongly related to B. flexuosa and B. boniopsis.

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Claims 10

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The complete chloroplast genome of B. albolineata is 139,326 bp long.

Taxon
B. albolineataBambusa albolineatae1
Outcome
complete CP genome sequencee2
Value
139,326 bpe2

Verbatim

e1

“the complete chloroplast (CP) genome of B. albolineata was sequenced”

✓ located verbatim in the source · abstract, characters 313–381 · show in text ↑
e2

“The complete CP genome sequence was 139,326 bp”

✓ located verbatim in the source · abstract, characters 415–461 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The large single-copy region of the B. albolineata chloroplast genome is 82,862 bp.

Taxon
B. albolineataBambusa albolineatae1
Outcome
large single-copy (LSC) regione2
Value
82,862 bpe2

Verbatim

e1

“the complete chloroplast (CP) genome of B. albolineata was sequenced”

✓ located verbatim in the source · abstract, characters 313–381 · show in text ↑
e2

“a large single-copy (LSC) region of 82,862 bp”

✓ located verbatim in the source · abstract, characters 473–518 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The small single-copy region of the B. albolineata chloroplast genome is 12,870 bp.

Taxon
B. albolineataBambusa albolineatae1
Outcome
small single-copy (SSC) regione2
Value
12,870 bpe2

Verbatim

e1

“the complete chloroplast (CP) genome of B. albolineata was sequenced”

✓ located verbatim in the source · abstract, characters 313–381 · show in text ↑
e2

“a small single-copy (SSC) region of 12,870 bp”

✓ located verbatim in the source · abstract, characters 520–565 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The inverted repeat regions of the B. albolineata chloroplast genome are 21,798 bp.

Taxon
B. albolineataBambusa albolineatae1
Outcome
invert repeats (IR) regionse2
Value
21,798 bpe2

Verbatim

e1

“the complete chloroplast (CP) genome of B. albolineata was sequenced”

✓ located verbatim in the source · abstract, characters 313–381 · show in text ↑
e2

“a pair of invert repeats (IR) regions of 21,798 bp”

✓ located verbatim in the source · abstract, characters 571–621 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The B. albolineata plastid genome consists of 129 genes.

Taxon
B. albolineataBambusa albolineatae1
Outcome
genese3
Value
129e3

Verbatim

e1

“the complete chloroplast (CP) genome of B. albolineata was sequenced”

✓ located verbatim in the source · abstract, characters 313–381 · show in text ↑
e3

“the plastid genome consisted of 129 genes”

✓ located verbatim in the source · abstract, characters 632–673 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The B. albolineata plastid genome contains 82 protein-coding genes.

Taxon
B. albolineataBambusa albolineatae1
Outcome
protein-coding genese3
Value
82e3

Verbatim

e1

“the complete chloroplast (CP) genome of B. albolineata was sequenced”

✓ located verbatim in the source · abstract, characters 313–381 · show in text ↑
e3

“having 82 protein-coding genes, 39 tRNA genes, and eight rRNA genes”

✓ located verbatim in the source · abstract, characters 675–742 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The B. albolineata plastid genome contains 39 tRNA genes.

Taxon
B. albolineataBambusa albolineatae1
Outcome
tRNA genese3
Value
39e3

Verbatim

e1

“the complete chloroplast (CP) genome of B. albolineata was sequenced”

✓ located verbatim in the source · abstract, characters 313–381 · show in text ↑
e3

“having 82 protein-coding genes, 39 tRNA genes, and eight rRNA genes”

✓ located verbatim in the source · abstract, characters 675–742 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The B. albolineata plastid genome contains eight rRNA genes.

Taxon
B. albolineataBambusa albolineatae1
Outcome
rRNA genese3
Value
eighte3

Verbatim

e1

“the complete chloroplast (CP) genome of B. albolineata was sequenced”

✓ located verbatim in the source · abstract, characters 313–381 · show in text ↑
e3

“having 82 protein-coding genes, 39 tRNA genes, and eight rRNA genes”

✓ located verbatim in the source · abstract, characters 675–742 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The overall GC content of the B. albolineata chloroplast genome is 44.2%.

Taxon
B. albolineataBambusa albolineatae1
Outcome
overall GC contente4
Value
44.2%e4

Verbatim

e1

“the complete chloroplast (CP) genome of B. albolineata was sequenced”

✓ located verbatim in the source · abstract, characters 313–381 · show in text ↑
e4

“The overall GC content of the genome was 44.2%”

✓ located verbatim in the source · abstract, characters 744–790 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

B. albolineata is strongly related to B. flexuosa and B. boniopsis based on the complete chloroplast genome.

Taxon
B. albolineataBambusa albolineatae5
Outcome
strongly relatede5
Direction
strongly relatede5
Comparator
B. flexuosa and B. boniopsise5

Verbatim

e5

“The phylogenetic analysis based on the complete chloroplast genome indicates that B. albolineata is strongly related to B. flexuosa and B. boniopsis”

✓ located verbatim in the source · abstract, characters 792–940 · show in text ↑