Paper · 2023 · Frontiers in Microbiology

Response of soil microbial communities and rice yield to nitrogen reduction with green manure application in karst paddy areas

Junyu Pu; Zhongyi Li; Hongqin Tang; et al.

9
claims
19
verbatim quotes
24
citations
2
research areas
✓
Open access · cc-by

Abstract

Fertilizer application practices are one of the major challenges facing agroecology. The agrobenefits of combined application of green manure and chemical fertilizers, and the potential of green manure to replace chemical fertilizers are now well documented. However, little is known about the impact of fertilization practices on microbial communities and tice yield. In this study, the diversity of bacterial and fungal communities, symbiotic networks and their relationship with soil function were analyzed in five fertilization treatments (N: 100% nitrogen fertilizer alone; M: green manure alone; MN 60 : green manure couple with 60% nitrogen fertilizer, MN 80 : green manure couple with 80% nitrogen fertilizer; and MN 100 : green manure couple with 100% nitrogen fertilizer). First, early rice yield was significantly higher by 12.6% in MN 100 treatment in 2021 compared with N. Secondly, soil bacterial diversity showed an increasing trend with increasing N fertilizer application after green manure input, however, the opposite was true for fungal diversity. Microbial interaction analysis showed that different fertilizer applications changed soil microbial network complexity and fertilizer-induced changes in soil microbial interactions were closely related to soil environmental changes. Random forest models further predicted the importance of soil environment, microorganisms and rice yield. Overall, nitrogen fertilizer green manure altered rice yield due to its effects on soil environment and microbial communities. In the case of combined green manure and N fertilizer application, bacteria and fungi showed different responses to fertilization method, and the full amount of N fertilizer in combination with green manure reduced the complexity of soil microbial network. In contrast, for more ecologically sensitive karst areas, we recommend fertilization practices with reduced N by 20–40% for rice production. Graphical Abstract

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Claims 9

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Early rice yield was 12.6% higher with green manure plus 100% N fertilizer than with 100% N fertilizer alone.

Treatment
green manure couple with 100% nitrogen fertilizere1
Outcome
early rice yielde0
Direction
highere0
Value
12.6%e0
Comparator
100% nitrogen fertilizer alonee2
Setting
karst paddy areast1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“early rice yield was significantly higher by 12.6% in MN 100 treatment in 2021 compared with N”

✓ located verbatim in the source · abstract, characters 790–884 · show in text ↑
e1

“MN 100 : green manure couple with 100% nitrogen fertilizer”

✓ located verbatim in the source · abstract, characters 722–780 · show in text ↑
e2

“N: 100% nitrogen fertilizer alone”

✓ located verbatim in the source · abstract, characters 544–577 · show in text ↑
t1

“in karst paddy areas”

✓ located verbatim in the source · title, characters 106–126 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Soil bacterial diversity showed an increasing trend with increasing N fertilizer application after green manure input.

Treatment
increasing N fertilizer application after green manure inpute3
Outcome
soil bacterial diversitye3
Direction
increasing trende3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“early rice yield was significantly higher by 12.6% in MN 100 treatment in 2021 compared with N”

✓ located verbatim in the source · abstract, characters 790–884 · show in text ↑
e3

“soil bacterial diversity showed an increasing trend with increasing N fertilizer application after green manure input, however, the opposite was true for fungal diversity”

✓ located verbatim in the source · abstract, characters 896–1066 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Fungal diversity showed the opposite trend to bacterial diversity with increasing N fertilizer application after green manure input.

Treatment
increasing N fertilizer application after green manure inpute3
Outcome
fungal diversitye3
Direction
the opposite was truee3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“early rice yield was significantly higher by 12.6% in MN 100 treatment in 2021 compared with N”

✓ located verbatim in the source · abstract, characters 790–884 · show in text ↑
e3

“soil bacterial diversity showed an increasing trend with increasing N fertilizer application after green manure input, however, the opposite was true for fungal diversity”

✓ located verbatim in the source · abstract, characters 896–1066 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Different fertilizer applications changed soil microbial network complexity.

Treatment
different fertilizer applicationse4
Outcome
soil microbial network complexitye4
Direction
changede4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“early rice yield was significantly higher by 12.6% in MN 100 treatment in 2021 compared with N”

✓ located verbatim in the source · abstract, characters 790–884 · show in text ↑
e4

“different fertilizer applications changed soil microbial network complexity”

✓ located verbatim in the source · abstract, characters 1111–1186 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

The full amount of N fertilizer combined with green manure reduced the complexity of the soil microbial network.

Treatment
the full amount of N fertilizer in combination with green manuree6
Outcome
the complexity of soil microbial networke6
Direction
reducede6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“early rice yield was significantly higher by 12.6% in MN 100 treatment in 2021 compared with N”

✓ located verbatim in the source · abstract, characters 790–884 · show in text ↑
e6

“the full amount of N fertilizer in combination with green manure reduced the complexity of soil microbial network”

✓ located verbatim in the source · abstract, characters 1676–1789 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Fertilizer-induced changes in soil microbial interactions were closely related to soil environmental changes.

Treatment
fertilizer-induced changese5
Outcome
soil microbial interactionse5
Qualifier
closely related to soil environmental changese5

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“early rice yield was significantly higher by 12.6% in MN 100 treatment in 2021 compared with N”

✓ located verbatim in the source · abstract, characters 790–884 · show in text ↑
e5

“fertilizer-induced changes in soil microbial interactions were closely related to soil environmental changes”

✓ located verbatim in the source · abstract, characters 1191–1299 · show in text ↑
Observationobservedoriginal resultsimulated

Claim · model-written summary

Random forest models predicted the importance of soil environment, microorganisms and rice yield.

Outcome
the importance of soil environment, microorganisms and rice yielde7
Qualifier
Random forest modelse7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“early rice yield was significantly higher by 12.6% in MN 100 treatment in 2021 compared with N”

✓ located verbatim in the source · abstract, characters 790–884 · show in text ↑
e7

“Random forest models further predicted the importance of soil environment, microorganisms and rice yield”

✓ located verbatim in the source · abstract, characters 1301–1405 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Nitrogen fertilizer combined with green manure altered rice yield through effects on soil environment and microbial communities.

Treatment
nitrogen fertilizer green manuree6
Outcome
rice yielde6
Qualifier
due to its effects on soil environment and microbial communitiese6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“early rice yield was significantly higher by 12.6% in MN 100 treatment in 2021 compared with N”

✓ located verbatim in the source · abstract, characters 790–884 · show in text ↑
e6

“nitrogen fertilizer green manure altered rice yield due to its effects on soil environment and microbial communities”

✓ located verbatim in the source · abstract, characters 1416–1532 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

Reducing N fertilizer by 20–40% is recommended for rice production in karst areas.

Outcome
fertilization practices with reduced Ne1
Value
20–40%e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“we recommend fertilization practices with reduced N by 20–40% for rice production”

✓ located verbatim in the source · abstract, characters 1849–1930 · show in text ↑

fertilization · yield · Oryza sativa (rice)Positive and negative results

3,455 papers: 3,183 positive, 272 negative or no effect

3,182 papers in the same direction as this paper · 207 in the opposite direction · 65 reporting no difference from an alternative

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