Paper · 2023 · Mağallaẗ zirāʿaẗ al-rāfidayn

EXISTENCE, MOLECULAR IDENTIFICATION AND GENETIC VARIATION OF NEW ISOLATES OF SEED GALL NEMATODE Anguina tritici PARASITIZING ON WHEAT AND BARLEY IN IRAQ

Sulaiman N. Ami; Rahma S. Guri

10
claims
18
verbatim quotes
1
citations
3
research areas
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Open access · cc-by

Abstract

This study aimed to investigate the existence of wheat seed gall nematode Anguina tritici in the silos and some wheat fileds in Duhok province / Kurdistan Region - Iraq.,and diagnose four new isolates of this nematode on wheat and one isolate on barley collected from different loactions in Iraq.The results indiacted that wheat impurities samples were infested with seed galls by 66 % as the highest percentager in silo of Faidia during 2020, while the lowest (6%) recoded in the silo of Zakho during the same year.The highest disease incidence was recorded in the wheat fields of Akre by 34.6%,while the lowest (2%) in the wheat fields of Semel. Molecular identification results revealed that the bands of amplified DNA products of all nematode isolates were visualized by agarose gel electrophoresis in the same position ("~" up to 750 bp).Sequencing of the partial gene 5.8S rRNA gene confirmed that all nematode isolates belong to seed gall nematode A.tritici, also a description of their accession number by blast program showed the same percentage identitiy (100 %), and their comparision by a DNA Dot Plot emphasized that they are genetically similar. Results of phylogenetic tree analysis showed grouping of nematode isolates with each other and with the other two isolates of the same species from Iraq,whilst nucleotide variations increased with other nematode species of the same genus,and increased more with other nematode species of the same family (Anguinidae).

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Claims 10

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Wheat impurities in Faidia silo had 66% seed gall infestation, the highest reported.

Interactor
seed gallse0pest
Outcome
infested with seed gallse0
Value
66 %e0
Setting
silo of Faidiae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“wheat impurities samples were infested with seed galls by 66 % as the highest percentager in silo of Faidia during 2020”

✓ located verbatim in the source · abstract, characters 323–442 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Wheat impurities in Zakho silo had the lowest infestation at 6%.

Outcome
loweste0
Value
6%e0
Setting
silo of Zakhoe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“WHEAT AND BARLEY”

✓ located verbatim in the source · title, characters 128–144 · show in text ↑
e0

“the lowest (6%) recoded in the silo of Zakho during the same year”

✓ located verbatim in the source · abstract, characters 450–515 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Wheat disease incidence was highest in Akre fields at 34.6%.

Outcome
disease incidencee0
Value
34.6%e0
Setting
Akree0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The highest disease incidence was recorded in the wheat fields of Akre by 34.6%”

✓ located verbatim in the source · abstract, characters 516–595 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Wheat disease incidence was lowest in Semel fields at 2%.

Outcome
wheat fields of Semele0
Value
2%e0
Setting
Semele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“WHEAT AND BARLEY”

✓ located verbatim in the source · title, characters 128–144 · show in text ↑
e0

“the lowest (2%) in the wheat fields of Semel”

✓ located verbatim in the source · abstract, characters 602–646 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

All nematode isolates showed DNA bands at approximately 750 bp.

Outcome
bands of amplified DNA products of all nematode isolatese0
Value
750 bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“WHEAT AND BARLEY”

✓ located verbatim in the source · title, characters 128–144 · show in text ↑
e0

“bands of amplified DNA products of all nematode isolates were visualized by agarose gel electrophoresis in the same position ("~" up to 750 bp)”

✓ located verbatim in the source · abstract, characters 699–842 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

5.8S rRNA sequencing identified all isolates as A. tritici.

Interactor
A.triticiAnguina triticie0pest
Gene
5.8S rRNA genee0
Outcome
all nematode isolates belong to seed gall nematode A.triticie0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Anguina tritici
Anguina tritici · Interactor · picture from its Wikimedia Commons categoryIan Riley from Niğde, Turkey · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“WHEAT AND BARLEY”

✓ located verbatim in the source · title, characters 128–144 · show in text ↑
e0

“Sequencing of the partial gene 5.8S rRNA gene confirmed that all nematode isolates belong to seed gall nematode A.tritici”

✓ located verbatim in the source · abstract, characters 843–964 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The isolates had 100% sequence identity and were genetically similar by DNA Dot Plot.

Outcome
genetically similare0
Value
100 %e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“WHEAT AND BARLEY”

✓ located verbatim in the source · title, characters 128–144 · show in text ↑
e0

“same percentage identitiy (100 %), and their comparision by a DNA Dot Plot emphasized that they are genetically similar”

✓ located verbatim in the source · abstract, characters 1039–1158 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phylogenetic analysis grouped the isolates with each other and two other Iraqi isolates.

Outcome
grouping of nematode isolatese0
Setting
Iraqe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“WHEAT AND BARLEY”

✓ located verbatim in the source · title, characters 128–144 · show in text ↑
e0

“grouping of nematode isolates with each other and with the other two isolates of the same species from Iraq”

✓ located verbatim in the source · abstract, characters 1205–1312 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Nucleotide variation increased relative to other nematode species of the same genus.

Outcome
nucleotide variationse0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“WHEAT AND BARLEY”

✓ located verbatim in the source · title, characters 128–144 · show in text ↑
e0

“nucleotide variations increased with other nematode species of the same genus”

✓ located verbatim in the source · abstract, characters 1320–1397 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Nucleotide variation increased more relative to other species of Anguinidae.

Outcome
increased moree0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“WHEAT AND BARLEY”

✓ located verbatim in the source · title, characters 128–144 · show in text ↑
e0

“increased more with other nematode species of the same family (Anguinidae)”

✓ located verbatim in the source · abstract, characters 1402–1476 · show in text ↑