Paper · 2019 · DOAJ (DOAJ: Directory of Open Access Journals)

The genetic diversity and genetic structure of the populations of Campylopus umbellatus (Arn.) Paris based on ISSR

SHAN Yiyi; SHEN Lin; LI Dandan; et al.

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claims
22
verbatim quotes
0
citations
2
research areas
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Open access · cc-by-sa

Abstract

To study the genetic diversity and population genetic structure characteristics of Campylopus umbellatus(Arn.) Paris,inter-simple sequence repeat (ISSR) marker technique method was used in the current study.40 individuals of 8 populations collected from Zhejiang,Jiangsu,Guangxi,Yunnan and Taiwan were detected by 12 ISSR primers.These primers generated 172 clear,repeatable bands.After analyzed by POPGENE 3.2 software,it was found that there were 158 polymorphic loci,of which the percentage of polymorphic bands(PPB) was 91.86%,Nei's Genetic Diversity Index (H) was 0.2922,Shannon-Wiener Index (I) was 0.4459.The results indicated that the populations of Campylopus umbellatus has high level of genetic diversity.The genetic differentiation index (Gst) of the eight populations was 0.6346,the gene flow (Nm) among populations was 0.2879,and the majority of genetic variation (63.33%) exists among populations,only 36.67% exists in populations,which showed that Campylopus umbellatus has obvious genetic differentiation among populations.Based on ISSR data,the dendrogram with a grouping threshold at a genetic distance of 65 showed that populations could be divided into 6 groups.According to our analyses,the genetic differentiation among the populations of Campylopus umbellatus mainly is caused by geographical factors,which may related to the habitat heterogeneity.

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Claims 12

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

ISSR primers generated 172 clear repeatable bands.

Taxon
Campylopus umbellatusCampylopus umbellatust0
Outcome
clear,repeatable bandse0
Value
172e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Campylopus umbellatus
Campylopus umbellatus · TaxonBramadi Arya · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“These primers generated 172 clear,repeatable bands”

✓ located verbatim in the source · abstract, characters 330–380 · show in text ↑
t0

“Campylopus umbellatus”

✓ located verbatim in the source · title, characters 66–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

There were 158 polymorphic loci.

Taxon
Campylopus umbellatusCampylopus umbellatust0
Outcome
polymorphic locie0
Value
158e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Campylopus umbellatus
Campylopus umbellatus · TaxonBramadi Arya · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“there were 158 polymorphic loci”

✓ located verbatim in the source · abstract, characters 438–469 · show in text ↑
t0

“Campylopus umbellatus”

✓ located verbatim in the source · title, characters 66–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Polymorphic bands represented 91.86%.

Taxon
Campylopus umbellatusCampylopus umbellatust0
Outcome
percentage of polymorphic bands(PPB)e0
Value
91.86%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Campylopus umbellatus
Campylopus umbellatus · TaxonBramadi Arya · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the percentage of polymorphic bands(PPB) was 91.86%”

✓ located verbatim in the source · abstract, characters 479–530 · show in text ↑
t0

“Campylopus umbellatus”

✓ located verbatim in the source · title, characters 66–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Nei genetic diversity index was 0.2922.

Taxon
Campylopus umbellatusCampylopus umbellatust0
Outcome
Nei's Genetic Diversity Index (H)e0
Value
0.2922e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Campylopus umbellatus
Campylopus umbellatus · TaxonBramadi Arya · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Nei's Genetic Diversity Index (H) was 0.2922”

✓ located verbatim in the source · abstract, characters 531–575 · show in text ↑
t0

“Campylopus umbellatus”

✓ located verbatim in the source · title, characters 66–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Shannon-Wiener index was 0.4459.

Taxon
Campylopus umbellatusCampylopus umbellatust0
Outcome
Shannon-Wiener Index (I)e0
Value
0.4459e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Campylopus umbellatus
Campylopus umbellatus · TaxonBramadi Arya · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Shannon-Wiener Index (I) was 0.4459”

✓ located verbatim in the source · abstract, characters 576–611 · show in text ↑
t0

“Campylopus umbellatus”

✓ located verbatim in the source · title, characters 66–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The populations had high genetic diversity.

Taxon
Campylopus umbellatusCampylopus umbellatuse0
Outcome
high level of genetic diversitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Campylopus umbellatus
Campylopus umbellatus · TaxonBramadi Arya · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the populations of Campylopus umbellatus has high level of genetic diversity”

✓ located verbatim in the source · abstract, characters 639–715 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Genetic differentiation index among eight populations was 0.6346.

Taxon
Campylopus umbellatusCampylopus umbellatust0
Outcome
genetic differentiation index (Gst)e0
Value
0.6346e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Campylopus umbellatus
Campylopus umbellatus · TaxonBramadi Arya · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The genetic differentiation index (Gst) of the eight populations was 0.6346”

✓ located verbatim in the source · abstract, characters 716–791 · show in text ↑
t0

“Campylopus umbellatus”

✓ located verbatim in the source · title, characters 66–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Gene flow among populations was 0.2879.

Taxon
Campylopus umbellatusCampylopus umbellatust0
Outcome
gene flow (Nm)e0
Value
0.2879e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Campylopus umbellatus
Campylopus umbellatus · TaxonBramadi Arya · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the gene flow (Nm) among populations was 0.2879”

✓ located verbatim in the source · abstract, characters 792–839 · show in text ↑
t0

“Campylopus umbellatus”

✓ located verbatim in the source · title, characters 66–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Among-population variation accounted for 63.33%.

Taxon
Campylopus umbellatusCampylopus umbellatust0
Outcome
genetic variatione0
Value
63.33%e0
Qualifier
among populationse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Campylopus umbellatus
Campylopus umbellatus · TaxonBramadi Arya · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the majority of genetic variation (63.33%) exists among populations”

✓ located verbatim in the source · abstract, characters 844–911 · show in text ↑
t0

“Campylopus umbellatus”

✓ located verbatim in the source · title, characters 66–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Within-population variation accounted for 36.67%.

Taxon
Campylopus umbellatusCampylopus umbellatust0
Outcome
genetic variatione0
Value
36.67%e0
Qualifier
in populationse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Campylopus umbellatus
Campylopus umbellatus · TaxonBramadi Arya · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the majority of genetic variation (63.33%) exists among populations,only 36.67% exists in populations”

✓ located verbatim in the source · abstract, characters 844–945 · show in text ↑
t0

“Campylopus umbellatus”

✓ located verbatim in the source · title, characters 66–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ISSR dendrogram divided populations into six groups at distance 65.

Taxon
Campylopus umbellatusCampylopus umbellatust0
Outcome
populations could be divided into 6 groupse0
Value
6 groupse0
Qualifier
genetic distance of 65e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Campylopus umbellatus
Campylopus umbellatus · TaxonBramadi Arya · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the dendrogram with a grouping threshold at a genetic distance of 65 showed that populations could be divided into 6 groups”

✓ located verbatim in the source · abstract, characters 1059–1182 · show in text ↑
t0

“Campylopus umbellatus”

✓ located verbatim in the source · title, characters 66–87 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Authors attribute population differentiation mainly to geographical factors and possibly habitat heterogeneity.

Taxon
Campylopus umbellatusCampylopus umbellatuse0
Outcome
genetic differentiation among the populationse0
Qualifier
geographical factors,which may related to the habitat heterogeneitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Campylopus umbellatus
Campylopus umbellatus · TaxonBramadi Arya · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the genetic differentiation among the populations of Campylopus umbellatus mainly is caused by geographical factors,which may related to the habitat heterogeneity”

✓ located verbatim in the source · abstract, characters 1209–1371 · show in text ↑