Paper · 2023 · AoB Plants

Tracking canopy chlorophyll fluorescence with a low-cost light emitting diode platform

Logan E G Brissette; Christopher Y S Wong; Devin P McHugh; et al.

4
claims
8
verbatim quotes
5
citations
3
research areas
✓
Open access · cc-by

Abstract

Abstract Chlorophyll fluorescence measured at the leaf scale through pulse amplitude modulation (PAM) has provided valuable insight into photosynthesis. At the canopy- and satellite-scale, solar-induced fluorescence (SIF) provides a method to estimate the photosynthetic activity of plants across spatiotemporal scales. However, retrieving SIF signal remotely requires instruments with high spectral resolution, making it difficult and often expensive to measure canopy-level steady-state chlorophyll fluorescence under natural sunlight. Considering this, we built a novel low-cost photodiode system that retrieves far-red chlorophyll fluorescence emission induced by a blue light emitting diode (LED) light source, for 2 h at night, above the canopy. Our objective was to determine if an active remote sensing-based night-time photodiode method could track changes in canopy-scale LED-induced chlorophyll fluorescence (LEDIF) during an imposed drought on a broadleaf evergreen shrub, Polygala myrtifolia. Far-red LEDIF (720–740 nm) was retrieved using low-cost photodiodes (LEDIFphotodiode) and validated against measurements from a hyperspectral spectroradiometer (LEDIFhyperspectral). To link the LEDIF signal with physiological drought response, we tracked stomatal conductance (gsw) using a porometer, two leaf-level vegetation indices—photochemical reflectance index and normalized difference vegetation index—to represent xanthophyll and chlorophyll pigment dynamics, respectively, and a PAM fluorimeter to measure photochemical and non-photochemical dynamics. Our results demonstrate a similar performance between the photodiode and hyperspectral retrievals of LEDIF (R2 = 0.77). Furthermore, LEDIFphotodiode closely tracked drought responses associated with a decrease in photochemical quenching (R2 = 0.69), Fv/Fm (R2 = 0.59) and leaf-level photochemical reflectance index (R2 = 0.59). Therefore, the low-cost LEDIFphotodiode approach has the potential to be a meaningful indicator of photosynthetic activity at spatial scales greater than an individual leaf and over time.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 4

Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Photodiode and hyperspectral LEDIF retrievals performed similarly, with R2 = 0.77.

Taxon
Polygala myrtifoliaPolygala myrtifoliat0
Outcome
performancee0
Value
R2 = 0.77e0
Comparator
hyperspectral retrievals of LEDIFe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Polygala myrtifolia
Polygala myrtifolia · TaxonSAplants · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“similar performance between the photodiode and hyperspectral retrievals of LEDIF (R2 = 0.77)”

✓ located verbatim in the source · abstract, characters 1594–1686 · show in text ↑
t0

“broadleaf evergreen shrub, Polygala myrtifolia”

✓ located verbatim in the source · abstract, characters 958–1004 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Photodiode LEDIF tracked the drought-associated decrease in photochemical quenching (R2 = 0.69).

Taxon
Polygala myrtifoliaPolygala myrtifoliat0
Outcome
photochemical quenchinge0
Direction
decreasee0
Value
R2 = 0.69e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Polygala myrtifolia
Polygala myrtifolia · TaxonSAplants · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“LEDIFphotodiode closely tracked drought responses associated with a decrease in photochemical quenching (R2 = 0.69)”

✓ located verbatim in the source · abstract, characters 1701–1816 · show in text ↑
t0

“Polygala myrtifolia”

✓ located verbatim in the source · abstract, characters 985–1004 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Photodiode LEDIF tracked the drought-associated decrease in Fv/Fm (R2 = 0.59).

Taxon
Polygala myrtifoliaPolygala myrtifoliat0
Outcome
Fv/Fme0
Direction
decreasee0
Value
R2 = 0.59e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Polygala myrtifolia
Polygala myrtifolia · TaxonSAplants · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“LEDIFphotodiode closely tracked drought responses associated with a decrease in photochemical quenching (R2 = 0.69), Fv/Fm (R2 = 0.59)”

✓ located verbatim in the source · abstract, characters 1701–1835 · show in text ↑
t0

“Polygala myrtifolia”

✓ located verbatim in the source · abstract, characters 985–1004 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Photodiode LEDIF tracked the drought-associated decrease in leaf photochemical reflectance index (R2 = 0.59).

Taxon
Polygala myrtifoliaPolygala myrtifoliat0
Outcome
leaf-level photochemical reflectance indexe0
Direction
decreasee0
Value
R2 = 0.59e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Polygala myrtifolia
Polygala myrtifolia · TaxonSAplants · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“LEDIFphotodiode closely tracked drought responses associated with a decrease in photochemical quenching (R2 = 0.69), Fv/Fm (R2 = 0.59) and leaf-level photochemical reflectance index (R2 = 0.59)”

✓ located verbatim in the source · abstract, characters 1701–1894 · show in text ↑
t0

“Polygala myrtifolia”

✓ located verbatim in the source · abstract, characters 985–1004 · show in text ↑