Paper · 2023 · Proceedings of the Komi Science Centre of the Ural Division of the Russian Academy of Sciences

Development of a PCR test system for the detection of Potato virus Y

E. Bessolicyna; A. Tulinov; N. Novoselova; et al.

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claims
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verbatim quotes
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citations
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research areas
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Open access

Abstract

Potato virus Y infects potato plants and causes serious damage to agriculture by reducing the yield of this crop. Therefore, there is a need to identify this pathogen. Potato viruses contain RNA, so immunological methods or PCR combined with reverse transcription can be used. The aim of this work was to develop a PCR test system for the detection of Potato virus Y. Primers for the reverse transcription reaction and subsequent PCR were found. Annealing temperatures and size of the amplified fragment were calculated. Primers and reaction conditions on plant material were tested. PCR products of the calculated size were obtained. The determination of their nucleotide sequence confirmed the identification of the genetic material of Potato virus Y. Thus, this PCR test system can be used to detect Potato virus Y.

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Claims 3

Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Primers and reaction conditions tested on plant material gave PCR products of the calculated size.

Outcome
PCR productse1
Comparator
calculated sizee1
Setting
plant materiale1

Verbatim

e1

“Primers and reaction conditions on plant material were tested. PCR products of the calculated size were obtained”

✓ located verbatim in the source · abstract, characters 521–633 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Nucleotide sequencing of the PCR products confirmed identification of the genetic material of Potato virus Y.

Taxon
Potato virus YPotato virus Ye1
Interactor
Potato virus YPotato virus Ye1pathogen
Outcome
identification of the genetic materiale1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Potato virus Y
Potato virus Y · TaxonMahmoud Hamdy Abd El-Aziz, Plant Pathology Institute, Agricultural. Research Center, Alexandria, Egyp · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The determination of their nucleotide sequence confirmed the identification of the genetic material of Potato virus Y”

✓ located verbatim in the source · abstract, characters 635–752 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors conclude that this PCR test system can be used to detect Potato virus Y.

Taxon
Potato virus YPotato virus Ye1
Interactor
Potato virus YPotato virus Ye1pathogen
Outcome
detect Potato virus Ye1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Potato virus Y
Potato virus Y · TaxonMahmoud Hamdy Abd El-Aziz, Plant Pathology Institute, Agricultural. Research Center, Alexandria, Egyp · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“this PCR test system can be used to detect Potato virus Y”

✓ located verbatim in the source · abstract, characters 760–817 · show in text ↑