Paper · 2024 · Revista mexicana de fitopatología(en línea)/Revista mexicana de fitopatología

Identification of phytoplasmas associated with Bunchy Top disease of papaya in Colima, Mexico

Pedro Valadez-Ramírez; Daniel Leobardo Ochoa-Martínez; Guadalupe Valdovinos-Ponce; et al.

11
claims
16
verbatim quotes
1
citations
2
research areas
✓
Open access

Abstract

Phytoplasmas, rickettsiae and viruses have been detected in papaya plants with Bunchy Top disease (BT). In 2019, papaya plants with BT-like symptoms were observed in agroecosystems of Colima, Mexico. In order to determine the BT-associated phytoplasmas species or subgroups, asymptomatic and symptomatic plants were collected from papaya agroecosystems in four papaya producer municipalities, as well as papaya-associated weeds and insects. Phytoplasma detection and identification was conducted by PCR, sequencing and phylogenetics of translocase subunit SecA (secA) and 16S ribosomal RNA (16Sr) genes, and PCR-RFLPs in vitro and in silico for 16Sr gene. In papaya, phytoplasma groups 16SrI (subgroup AF), 16SrX, and 16SrXIII were identified in 2.08% (4 out of 192) symptomatic samples. The results of RFLPs in silico analysis showing the presence of 16SrX and 16SrXIII (sub)groups. In papaya-associated weeds and insects, phytoplasmas of group 16SrI (subgroups AF and B) were identified in 1.7% (3 out of 174) and 1.1% (2 out of 185) evaluated samples, respectively. Phytoplasma-carrying weeds were Amaranthus palmeri and Echinochloa colona; positive insects were Micrutalis calva and Balclutha mexicana. It is the first time that phytoplasmas 16SrI-AF, 16SrX y 16SrXIII are associated with Bunchy Top disease of papaya in agroecosystems from Colima, Mexico. Phytoplasmas 16SrX y 16SrXIII are first reported in papaya plants at the world level and in Mexico, respectively. Phytoplasma-carrying weeds and insects are new records as natural reservoirs and potential vectors.

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Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

Symptomatic papaya samples contained phytoplasma groups 16SrI-AF, 16SrX and 16SrXIII in 2.08% of samples.

Taxon
papayaCarica papayae0
Interactor
phytoplasmaCandidatus Phytoplasmae0pathogen
Outcome
phytoplasma groups 16SrI (subgroup AF), 16SrX, and 16SrXIIIe0
Value
2.08%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Carica papaya
Carica papaya · TaxonCarlquist, Sherwin John, 1930-2021 · CC BY 4.0 · Wikimedia Commons ↗
Candidatus Phytoplasma
Candidatus Phytoplasma · Interactor · picture of the genus (one of its species)Estreya · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In papaya, phytoplasma groups 16SrI (subgroup AF), 16SrX, and 16SrXIII were identified in 2.08% (4 out of 192) symptomatic samples.”

✓ located verbatim in the source · abstract, characters 656–787 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

In silico RFLP analysis indicated 16SrX and 16SrXIII subgroups.

Taxon
papayaCarica papayat0
Outcome
presence of 16SrX and 16SrXIII (sub)groupse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Carica papaya
Carica papaya · TaxonCarlquist, Sherwin John, 1930-2021 · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The results of RFLPs in silico analysis showing the presence of 16SrX and 16SrXIII (sub)groups.”

✓ located verbatim in the source · abstract, characters 788–883 · show in text ↑
t0

“papaya”

✓ located verbatim in the source · title, characters 69–75 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phytoplasmas 16SrI-AF and B were detected in 1.7% of papaya-associated weed samples.

Taxon
weedse0
Interactor
phytoplasmasCandidatus Phytoplasmae0pathogen
Outcome
phytoplasmas of group 16SrI (subgroups AF and B)e0
Value
1.7%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Candidatus Phytoplasma
Candidatus Phytoplasma · Interactor · picture of the genus (one of its species)Estreya · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In papaya-associated weeds and insects, phytoplasmas of group 16SrI (subgroups AF and B) were identified in 1.7% (3 out of 174) and 1.1% (2 out of 185) evaluated samples, respectively.”

✓ located verbatim in the source · abstract, characters 884–1068 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phytoplasmas 16SrI-AF and B were detected in 1.1% of papaya-associated insect samples.

Taxon
insectsInsectae0
Interactor
phytoplasmasCandidatus Phytoplasmae0other
Outcome
phytoplasmas of group 16SrI (subgroups AF and B)e0
Value
1.1%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Candidatus Phytoplasma
Candidatus Phytoplasma · Interactor · picture of the genus (one of its species)Estreya · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In papaya-associated weeds and insects, phytoplasmas of group 16SrI (subgroups AF and B) were identified in 1.7% (3 out of 174) and 1.1% (2 out of 185) evaluated samples, respectively.”

✓ located verbatim in the source · abstract, characters 884–1068 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Amaranthus palmeri was a phytoplasma-carrying weed, newly recorded as a natural reservoir.

Taxon
Amaranthus palmeriAmaranthus palmerie0
Outcome
Phytoplasma-carryinge0
Qualifier
new records as natural reservoirs and potential vectorse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Amaranthus palmeri
Amaranthus palmeri · TaxonPompilid · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Phytoplasma-carrying weeds were Amaranthus palmeri and Echinochloa colona”

✓ located verbatim in the source · abstract, characters 1069–1142 · show in text ↑
e1

“Phytoplasma-carrying weeds and insects are new records as natural reservoirs and potential vectors.”

✓ located verbatim in the source · abstract, characters 1475–1574 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Echinochloa colona was a phytoplasma-carrying weed, newly recorded as a natural reservoir.

Taxon
Echinochloa colonaEchinochloa colonae0
Outcome
Phytoplasma-carryinge0
Qualifier
new records as natural reservoirs and potential vectorse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Echinochloa colona
Echinochloa colona · TaxonTauʻolunga · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Phytoplasma-carrying weeds were Amaranthus palmeri and Echinochloa colona”

✓ located verbatim in the source · abstract, characters 1069–1142 · show in text ↑
e1

“Phytoplasma-carrying weeds and insects are new records as natural reservoirs and potential vectors.”

✓ located verbatim in the source · abstract, characters 1475–1574 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Micrutalis calva was phytoplasma-positive and a newly recorded potential vector.

Taxon
Micrutalis calvaMicrutalis calvae0
Outcome
positivee0
Qualifier
potential vectorse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Micrutalis calva
Micrutalis calva · Taxonmoxostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“positive insects were Micrutalis calva and Balclutha mexicana.”

✓ located verbatim in the source · abstract, characters 1144–1206 · show in text ↑
e1

“Phytoplasma-carrying weeds and insects are new records as natural reservoirs and potential vectors.”

✓ located verbatim in the source · abstract, characters 1475–1574 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Balclutha mexicana was phytoplasma-positive and a newly recorded potential vector.

Taxon
Balclutha mexicanae0
Outcome
positivee0
Qualifier
potential vectorse1

Verbatim

e0

“positive insects were Micrutalis calva and Balclutha mexicana.”

✓ located verbatim in the source · abstract, characters 1144–1206 · show in text ↑
e1

“Phytoplasma-carrying weeds and insects are new records as natural reservoirs and potential vectors.”

✓ located verbatim in the source · abstract, characters 1475–1574 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The association of phytoplasmas 16SrI-AF, 16SrX and 16SrXIII with papaya Bunchy Top was first reported in Colima.

Taxon
papayaCarica papayae0
Interactor
phytoplasmas 16SrI-AF, 16SrX y 16SrXIIIe0pathogen
Outcome
Bunchy Top diseasee0
Setting
Colima, Mexicoe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Carica papaya
Carica papaya · TaxonCarlquist, Sherwin John, 1930-2021 · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“It is the first time that phytoplasmas 16SrI-AF, 16SrX y 16SrXIII are associated with Bunchy Top disease of papaya in agroecosystems from Colima, Mexico.”

✓ located verbatim in the source · abstract, characters 1207–1360 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

16SrX phytoplasmas were first reported in papaya worldwide.

Taxon
papayaCarica papayae0
Interactor
16SrXe0pathogen
Outcome
first reportede0
Qualifier
at the world levele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Carica papaya
Carica papaya · TaxonCarlquist, Sherwin John, 1930-2021 · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Phytoplasmas 16SrX y 16SrXIII are first reported in papaya plants at the world level and in Mexico, respectively.”

✓ located verbatim in the source · abstract, characters 1361–1474 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

16SrXIII phytoplasmas were first reported in papaya in Mexico.

Taxon
papayaCarica papayae0
Interactor
16SrXIIIe0pathogen
Outcome
first reportede0
Setting
Mexicoe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Carica papaya
Carica papaya · TaxonCarlquist, Sherwin John, 1930-2021 · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Phytoplasmas 16SrX y 16SrXIII are first reported in papaya plants at the world level and in Mexico, respectively.”

✓ located verbatim in the source · abstract, characters 1361–1474 · show in text ↑