Paper · 2024 · Journal of Phytopathology

Armillaria Species Causing Kiwifruit Vine Decline and Root Rot in Northeastern Türkiye: A Growing Concern for Kiwifruit Health

Muharrem Türkkan; Tuğba Bozoğlu; Sibel Derviş; et al.

10
claims
17
verbatim quotes
6
citations
2
research areas
—
Not open access

Abstract

ABSTRACT Kiwifruit ( Actinidia deliciosa ) production in northeastern Türkiye is facing an emerging threat from Armillaria root rot. Surveys conducted in August 2021 and 2022 revealed that 10.5%–17.5% of the 200–500 vines within each of 35 kiwifruit orchards in the Perşembe, Gülyalı and Altınordu districts of Ordu province exhibited symptoms of Armillaria root rot, including complete defoliation. Diseased plants exhibited diagnostic signs on their root collars and woody roots, including white mycelial fans, extensive wood rot and rhizomorphs. A single Armillaria isolate was obtained from each of the 35 symptomatic orchards. Molecular identification, employing DNA sequencing of the large subunit (LSU) region of rDNA, the translation elongation factor subunit 1‐alpha ( TEF1 ) gene and the second largest RNA polymerase II B‐subunit ( RPB2 ) gene, identified 20 isolates as Armillaria gallica and 15 as A . mellea . Phylogenetic analyses, based on TEF1 alignments, further supported the species identification with a 100% bootstrap value. To examine genetic diversity, start codon targeted (SCoT) marker 13 was used, successfully differentiating the two Armillaria species and revealing three distinct clades. Clades I and II comprised 15 and 5 isolates of A . gallica , respectively, while Clade III contained all 15 A . mellea isolates. Pathogenicity testing on kiwifruit seedlings (cv. Hayward) revealed the ability of both A . gallica and A . mellea isolates to induce disease. Rhizomorph‐producing isolates in kiwifruit seedlings displayed high virulence, inducing severe leaf necrosis and seedling mortality, while isolates lacking these structures were non‐pathogenic. This study identifies the first global instance of A . gallica causing kiwifruit root rot. This finding, along with the identification of A . mellea as a causal agent in the country, highlights the emerging threat of Armillaria root rot to kiwifruit production in the region.

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Claims 10

Observationobservedoriginal resultmeasured

Claim · model-written summary

Between 10.5% and 17.5% of vines in each of 35 orchards showed Armillaria root rot symptoms.

Taxon
kiwifruitActinidia deliciosae1
Interactor
ArmillariaArmillariae1pathogen
Outcome
symptoms of Armillaria root rote1
Value
10.5%–17.5%e1
Setting
Ordu provincee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Actinidia deliciosa
Actinidia deliciosa · TaxonLuis Miguel Bugallo Sánchez ( Lmbuga ) Copyright: GFDL ( GNU Free Documentation License ) Publicada por/ Publish by : Luis Miguel Bugallo Sánchez · CC BY-SA 3.0 · Wikimedia Commons ↗
Armillaria
Armillaria · Interactor · picture of the genus (one of its species)Stu's Images · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Surveys conducted in August 2021 and 2022 revealed that 10.5%–17.5% of the 200–500 vines within each of 35 kiwifruit orchards in the Perşembe, Gülyalı and Altınordu districts of Ordu province exhibited symptoms of Armillaria root rot, including complete defoliation”

✓ located verbatim in the source · abstract, characters 133–398 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Twenty isolates were identified as Armillaria gallica.

Taxon
kiwifruitActinidia deliciosat0
Interactor
Armillaria gallicaArmillaria gallicae2pathogen
Outcome
identified 20 isolates as Armillaria gallicae2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Actinidia deliciosa
Actinidia deliciosa · TaxonLuis Miguel Bugallo Sánchez ( Lmbuga ) Copyright: GFDL ( GNU Free Documentation License ) Publicada por/ Publish by : Luis Miguel Bugallo Sánchez · CC BY-SA 3.0 · Wikimedia Commons ↗
Armillaria gallica
Armillaria gallica · InteractorThis image was created by user Dan Molter (shroomydan) at Mushroom Observer , a source for mycological images. You can contact this user here . · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Kiwifruit Vine Decline”

✓ located verbatim in the source · title, characters 27–49 · show in text ↑
e2

“identified 20 isolates as Armillaria gallica and 15 as A . mellea”

✓ located verbatim in the source · abstract, characters 856–921 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Fifteen isolates were identified as A. mellea.

Taxon
kiwifruitActinidia deliciosat0
Interactor
A . melleaArmillaria melleae2pathogen
Outcome
15 as A . melleae2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Actinidia deliciosa
Actinidia deliciosa · TaxonLuis Miguel Bugallo Sánchez ( Lmbuga ) Copyright: GFDL ( GNU Free Documentation License ) Publicada por/ Publish by : Luis Miguel Bugallo Sánchez · CC BY-SA 3.0 · Wikimedia Commons ↗
Armillaria mellea
Armillaria mellea · Interactortomasz przechlewski from Sopot, Poland · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Kiwifruit Vine Decline”

✓ located verbatim in the source · title, characters 27–49 · show in text ↑
e2

“identified 20 isolates as Armillaria gallica and 15 as A . mellea”

✓ located verbatim in the source · abstract, characters 856–921 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Clades I and II comprise 15 and 5 isolates of A. gallica.

Taxon
KiwifruitActinidia deliciosat0
Interactor
A . gallicaArmillaria gallicae3pathogen
Outcome
isolates of A . gallicae3
Value
15 and 5e3
Qualifier
Clades I and IIe3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Actinidia deliciosa
Actinidia deliciosa · TaxonLuis Miguel Bugallo Sánchez ( Lmbuga ) Copyright: GFDL ( GNU Free Documentation License ) Publicada por/ Publish by : Luis Miguel Bugallo Sánchez · CC BY-SA 3.0 · Wikimedia Commons ↗
Armillaria gallica
Armillaria gallica · InteractorThis image was created by user Dan Molter (shroomydan) at Mushroom Observer , a source for mycological images. You can contact this user here . · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Kiwifruit Vine Decline”

✓ located verbatim in the source · title, characters 27–49 · show in text ↑
e3

“Clades I and II comprised 15 and 5 isolates of A . gallica , respectively, while Clade III contained all 15 A . mellea isolates”

✓ located verbatim in the source · abstract, characters 1218–1345 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Clade III contains all 15 A. mellea isolates.

Taxon
KiwifruitActinidia deliciosat0
Interactor
A . melleaArmillaria melleae3pathogen
Outcome
Clade III contained all 15 A . mellea isolatese3
Value
15e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Actinidia deliciosa
Actinidia deliciosa · TaxonLuis Miguel Bugallo Sánchez ( Lmbuga ) Copyright: GFDL ( GNU Free Documentation License ) Publicada por/ Publish by : Luis Miguel Bugallo Sánchez · CC BY-SA 3.0 · Wikimedia Commons ↗
Armillaria mellea
Armillaria mellea · Interactortomasz przechlewski from Sopot, Poland · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Kiwifruit Vine Decline”

✓ located verbatim in the source · title, characters 27–49 · show in text ↑
e3

“Clades I and II comprised 15 and 5 isolates of A . gallica , respectively, while Clade III contained all 15 A . mellea isolates”

✓ located verbatim in the source · abstract, characters 1218–1345 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Both A. gallica and A. mellea isolates induce disease in kiwifruit seedlings.

Taxon
kiwifruitActinidia deliciosat0
Material
cv. Haywarde4
Interactor
A . gallicaArmillaria gallicae4pathogen
Second interactor
A . melleaArmillaria melleae4pathogen
Outcome
induce diseasee4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Actinidia deliciosa
Actinidia deliciosa · TaxonLuis Miguel Bugallo Sánchez ( Lmbuga ) Copyright: GFDL ( GNU Free Documentation License ) Publicada por/ Publish by : Luis Miguel Bugallo Sánchez · CC BY-SA 3.0 · Wikimedia Commons ↗
Armillaria gallica
Armillaria gallica · InteractorThis image was created by user Dan Molter (shroomydan) at Mushroom Observer , a source for mycological images. You can contact this user here . · CC BY-SA 3.0 · Wikimedia Commons ↗
Armillaria mellea
Armillaria mellea · Second interactortomasz przechlewski from Sopot, Poland · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Kiwifruit Vine Decline”

✓ located verbatim in the source · title, characters 27–49 · show in text ↑
e4

“Pathogenicity testing on kiwifruit seedlings (cv. Hayward) revealed the ability of both A . gallica and A . mellea isolates to induce disease”

✓ located verbatim in the source · abstract, characters 1347–1488 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Rhizomorph-producing isolates cause severe leaf necrosis and seedling mortality in kiwifruit seedlings.

Taxon
kiwifruitActinidia deliciosae5
Outcome
severe leaf necrosis and seedling mortalitye5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Actinidia deliciosa
Actinidia deliciosa · TaxonLuis Miguel Bugallo Sánchez ( Lmbuga ) Copyright: GFDL ( GNU Free Documentation License ) Publicada por/ Publish by : Luis Miguel Bugallo Sánchez · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“Rhizomorph‐producing isolates in kiwifruit seedlings displayed high virulence, inducing severe leaf necrosis and seedling mortality, while isolates lacking these structures were non‐pathogenic”

✓ located verbatim in the source · abstract, characters 1490–1682 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Isolates lacking rhizomorphs are non-pathogenic to kiwifruit seedlings.

Taxon
kiwifruitActinidia deliciosae5
Outcome
isolates lacking these structures were non‐pathogenice5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Actinidia deliciosa
Actinidia deliciosa · TaxonLuis Miguel Bugallo Sánchez ( Lmbuga ) Copyright: GFDL ( GNU Free Documentation License ) Publicada por/ Publish by : Luis Miguel Bugallo Sánchez · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“Rhizomorph‐producing isolates in kiwifruit seedlings displayed high virulence, inducing severe leaf necrosis and seedling mortality, while isolates lacking these structures were non‐pathogenic”

✓ located verbatim in the source · abstract, characters 1490–1682 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

This is the first global instance of A. gallica causing kiwifruit root rot.

Taxon
kiwifruitActinidia deliciosat0
Interactor
A . gallicaArmillaria gallicae6pathogen
Outcome
first global instance of A . gallica causing kiwifruit root rote6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Actinidia deliciosa
Actinidia deliciosa · TaxonLuis Miguel Bugallo Sánchez ( Lmbuga ) Copyright: GFDL ( GNU Free Documentation License ) Publicada por/ Publish by : Luis Miguel Bugallo Sánchez · CC BY-SA 3.0 · Wikimedia Commons ↗
Armillaria gallica
Armillaria gallica · InteractorThis image was created by user Dan Molter (shroomydan) at Mushroom Observer , a source for mycological images. You can contact this user here . · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Kiwifruit Vine Decline”

✓ located verbatim in the source · title, characters 27–49 · show in text ↑
e6

“This study identifies the first global instance of A . gallica causing kiwifruit root rot”

✓ located verbatim in the source · abstract, characters 1684–1773 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A. mellea is a causal agent of kiwifruit root rot in the country.

Taxon
KiwifruitActinidia deliciosat0
Interactor
A . melleaArmillaria melleae7pathogen
Outcome
identification of A . mellea as a causal agent in the countrye7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Actinidia deliciosa
Actinidia deliciosa · TaxonLuis Miguel Bugallo Sánchez ( Lmbuga ) Copyright: GFDL ( GNU Free Documentation License ) Publicada por/ Publish by : Luis Miguel Bugallo Sánchez · CC BY-SA 3.0 · Wikimedia Commons ↗
Armillaria mellea
Armillaria mellea · Interactortomasz przechlewski from Sopot, Poland · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Kiwifruit Vine Decline”

✓ located verbatim in the source · title, characters 27–49 · show in text ↑
e7

“along with the identification of A . mellea as a causal agent in the country”

✓ located verbatim in the source · abstract, characters 1789–1865 · show in text ↑