Paper · 2025 · Phytobiomes Journal

Eight Years in the Soil: Temporal Dynamics of Wheat-Associated Bacterial Communities Under Dryland and Irrigated Conditions

Mingming Yang; Daniel C. Schlatter; Melissa K. LeTourneau; et al.

10
claims
20
verbatim quotes
3
citations
2
research areas
✓
Open access · public-domain

Abstract

Plants and their associated microbiomes are impacted by environmental factors that shape their interactions over time, but long-term trends in microbial community dynamics are not well characterized. We identified the seasonal and long-term population dynamics of root-associated bacterial communities over 8 years in monocropped wheat grown in adjacent dryland and irrigated plots in the low-precipitation region of Washington State. Spring wheat plants were sampled at various times during the growing season over 8 years, and rhizosphere and endosphere communities were characterized using 16S rRNA amplicon sequencing. Analyses throughout the first 3 years revealed genera with distinct annual periodicity in response to growing season conditions. Bacterial richness and diversity were significantly greater in irrigated than in dryland wheat and in the rhizosphere than in the endosphere, apparently driven by the physiological state of the root and root exudates and/or by soil water. Over 8 years, copiotrophic Proteobacteria and Bacteroidetes ( Pseudomonas, Variovorax, Chryseobacterium) maintained stable populations, whereas Actinobacteria decreased in abundance independent of irrigation. Populations of some Bacteroidetes and Proteobacteria ( Mucilaginibacter, Sphingomonas, Massilia, Burkholderia) persisted or increased in relative abundance in the dryland rhizosphere, whereas others ( Rhizobium, Acidovorax, Terrimonas, Hyphomicrobium, Bdellovibrio) increased under irrigation. In contrast, endosphere taxa, including Actinobacteria, declined in relative abundance regardless of irrigation, indicating that the maturing host, and not water, is the main driver of these populations. Our results provide insight into the long-term dynamics of bacterial communities of wheat under contrasting soil water conditions and guide future efforts to improve crop performance under drought conditions. [Formula: see text] The author(s) have dedicated the work to the public domain under the Creative Commons CC0 “No Rights Reserved” license by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law, 2025.

Abstract from the paper’s OpenAlex record; open copy licensed public-domain. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Observationobservedoriginal resultmeasured

Claim · model-written summary

Analyses of the first 3 years revealed bacterial genera with distinct annual periodicity in response to growing season conditions.

Interactor
Bacterial Communitiest0other
Outcome
genera with distinct annual periodicitye0
Qualifier
first 3 yearse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Wheat-Associated Bacterial Communities Under Dryland and Irrigated Conditions”

✓ located verbatim in the source · title, characters 46–123 · show in text ↑
e0

“Analyses throughout the first 3 years revealed genera with distinct annual periodicity in response to growing season conditions”

✓ located verbatim in the source · abstract, characters 623–750 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Bacterial richness and diversity were significantly greater in irrigated than in dryland wheat.

Treatment
irrigatede0
Interactor
Bacteriale0other
Outcome
Bacterial richness and diversitye0
Direction
greatere0
Comparator
drylande0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Wheat-Associated Bacterial Communities Under Dryland and Irrigated Conditions”

✓ located verbatim in the source · title, characters 46–123 · show in text ↑
e0

“Bacterial richness and diversity were significantly greater in irrigated than in dryland wheat and in the rhizosphere than in the endosphere”

✓ located verbatim in the source · abstract, characters 752–892 · show in text ↑
Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Bacterial richness and diversity were significantly greater in the rhizosphere than in the endosphere.

Organ / stage
rhizospheree0
Interactor
Bacteriale0other
Outcome
Bacterial richness and diversitye0
Direction
greatere0
Comparator
endospheree0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Wheat-Associated Bacterial Communities Under Dryland and Irrigated Conditions”

✓ located verbatim in the source · title, characters 46–123 · show in text ↑
e0

“Bacterial richness and diversity were significantly greater in irrigated than in dryland wheat and in the rhizosphere than in the endosphere”

✓ located verbatim in the source · abstract, characters 752–892 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

The greater richness and diversity are apparently driven by root physiological state and exudates and/or by soil water.

Outcome
Bacterial richness and diversitye0
Qualifier
physiological state of the root and root exudates and/or by soil watere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Wheat-Associated Bacterial Communities Under Dryland and Irrigated Conditions”

✓ located verbatim in the source · title, characters 46–123 · show in text ↑
e0

“Bacterial richness and diversity were significantly greater in irrigated than in dryland wheat and in the rhizosphere than in the endosphere, apparently driven by the physiological state of the root and root exudates and/or by soil water”

✓ located verbatim in the source · abstract, characters 752–989 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Over 8 years, Pseudomonas, Variovorax and Chryseobacterium (copiotrophic Proteobacteria and Bacteroidetes) maintained stable populations.

Interactor
Pseudomonas, Variovorax, ChryseobacteriumPseudomonasVariovoraxChryseobacteriume0other
Outcome
stable populationse0
Qualifier
Over 8 yearse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas
Pseudomonas · Interactor · picture of the genus (one of its species)CDC · Public domain · Wikimedia Commons ↗
Chryseobacterium
Chryseobacterium · Interactor · picture of the genus (one of its species)Dukas.ju · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Wheat-Associated Bacterial Communities Under Dryland and Irrigated Conditions”

✓ located verbatim in the source · title, characters 46–123 · show in text ↑
e0

“Over 8 years, copiotrophic Proteobacteria and Bacteroidetes ( Pseudomonas, Variovorax, Chryseobacterium) maintained stable populations”

✓ located verbatim in the source · abstract, characters 991–1125 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Actinobacteria decreased in abundance over 8 years independent of irrigation.

Interactor
ActinobacteriaActinomycetotae0other
Outcome
abundancee0
Direction
decreasede0
Qualifier
independent of irrigatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Wheat-Associated Bacterial Communities Under Dryland and Irrigated Conditions”

✓ located verbatim in the source · title, characters 46–123 · show in text ↑
e0

“Actinobacteria decreased in abundance independent of irrigation”

✓ located verbatim in the source · abstract, characters 1135–1198 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Mucilaginibacter, Sphingomonas, Massilia and Burkholderia persisted or increased in relative abundance in the dryland rhizosphere.

Organ / stage
rhizospheree0
Treatment
drylande0
Interactor
Mucilaginibacter, Sphingomonas, Massilia, BurkholderiaSphingomonasBurkholderiaMassiliaMucilaginibactere0other
Outcome
relative abundancee0
Direction
persisted or increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Sphingomonas
Sphingomonas · Interactor · picture of the genus (one of its species)Alan Rockefeller · CC BY-SA 4.0 · Wikimedia Commons ↗
Burkholderia
Burkholderia · Interactor · picture from its Wikimedia Commons categoryMelww at English Wikipedia · CC BY 3.0 · Wikimedia Commons ↗
Massilia
Massilia · Interactor · picture from its Wikimedia Commons categoryHong-Hui Zhu · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Wheat-Associated Bacterial Communities Under Dryland and Irrigated Conditions”

✓ located verbatim in the source · title, characters 46–123 · show in text ↑
e0

“Populations of some Bacteroidetes and Proteobacteria ( Mucilaginibacter, Sphingomonas, Massilia, Burkholderia) persisted or increased in relative abundance in the dryland rhizosphere”

✓ located verbatim in the source · abstract, characters 1200–1382 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Rhizobium, Acidovorax, Terrimonas, Hyphomicrobium and Bdellovibrio increased in relative abundance under irrigation.

Treatment
irrigatione0
Interactor
Rhizobium, Acidovorax, Terrimonas, Hyphomicrobium, BdellovibrioHyphomicrobiumRhizobiumBdellovibrioAcidovoraxTerrimonase0other
Outcome
increased under irrigatione0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗
Hyphomicrobium
Hyphomicrobium · Interactor · picture of the genus (one of its species)Moore R.L., Hirsch P. · CC BY-SA 3.0 · Wikimedia Commons ↗
Rhizobium
Rhizobium · Interactor · picture of the genus (one of its species)Ninjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗
Bdellovibrio
Bdellovibrio · Interactor · picture of the genus (one of its species)Eikosi · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Wheat-Associated Bacterial Communities Under Dryland and Irrigated Conditions”

✓ located verbatim in the source · title, characters 46–123 · show in text ↑
e0

“others ( Rhizobium, Acidovorax, Terrimonas, Hyphomicrobium, Bdellovibrio) increased under irrigation”

✓ located verbatim in the source · abstract, characters 1392–1492 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Endosphere taxa, including Actinobacteria, declined in relative abundance regardless of irrigation.

Organ / stage
endospheree0
Interactor
ActinobacteriaActinomycetotae0other
Outcome
relative abundancee0
Direction
declinede0
Qualifier
regardless of irrigatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Wheat-Associated Bacterial Communities Under Dryland and Irrigated Conditions”

✓ located verbatim in the source · title, characters 46–123 · show in text ↑
e0

“In contrast, endosphere taxa, including Actinobacteria, declined in relative abundance regardless of irrigation”

✓ located verbatim in the source · abstract, characters 1494–1605 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The maturing host, and not water, is the main driver of the endosphere bacterial populations.

Outcome
main driver of these populationse0
Qualifier
the maturing host, and not watere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Wheat-Associated Bacterial Communities Under Dryland and Irrigated Conditions”

✓ located verbatim in the source · title, characters 46–123 · show in text ↑
e0

“indicating that the maturing host, and not water, is the main driver of these populations”

✓ located verbatim in the source · abstract, characters 1607–1696 · show in text ↑