Paper · 2025 · Canadian Journal of Microbiology

Isolation, identification, and community study of root fungal isolates from disturbed and undisturbed Arctic and alpine tundra habitats in Northern Quebec, Canada

Léonie Côté; Godar Sene; Marie-Eve Beaulieu; et al.

5
claims
13
verbatim quotes
0
citations
2
research areas
—
Not open access

Abstract

In northern ecosystems such as the subarctic tundra, mining activities increase stress to a point where actions are needed to promote site reclamation. Ecological restoration of these mining-impacted sites with beneficial microorganisms, such as mycorrhizal fungi, is considered necessary and useful for the growth and survival of their host plants, but also for their tolerance to poor and contaminated environments, such as mine tailings. Here, we are interested in root symbionts associated with plants from the Schefferville mining site in northern Quebec. Very few studies of root fungal communities have been conducted in such a northern environment. The spatial and host plant variation of root fungal isolates was investigated. A total of 456 culturable fungi were isolated, of which 376 were successfully identified and assigned to 106 taxa based on rDNA internal transcribed spacer analysis using ITSF-1 and ITS-4 primers. The most commonly isolated fungi belonged to three genetically related groups: the Rhizoscyphus ericae aggregate, the dark septate endophytes, and Umbelopsis rammaniana and Mortierella sp., which are known to be genetically very close and often misclassified as one another. These groups were present on both disturbed and natural sites, but it appears that plants from disturbed sites had a greater affinity for dark septate endophytes. This study is the first step in the development of a restoration plan for the Schefferville mining site, and the baseline data obtained open new avenues for future studies, including the use of indigenous mycorrhizal-based biofertilizers to implement ecological revegetation strategies.

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Claims 5

Observationobservedoriginal resultmeasured

Claim · model-written summary

The study isolated 456 culturable fungi from plant roots.

Taxon
plantsViridiplantaee1
Outcome
culturable fungi were isolatede0
Value
456e0

Verbatim

e0

“A total of 456 culturable fungi were isolated”

✓ located verbatim in the source · abstract, characters 736–781 · show in text ↑
t0

“root fungal isolates from disturbed and undisturbed Arctic and alpine tundra habitats in Northern Quebec, Canada”

✓ located verbatim in the source · title, characters 50–162 · show in text ↑
e1

“plants from disturbed sites had a greater affinity for dark septate endophytes”

✓ located verbatim in the source · abstract, characters 1291–1369 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Of the fungal isolates, 376 were identified and assigned to 106 taxa.

Taxon
plantsViridiplantaee1
Outcome
successfully identifiede0
Value
376e0
Qualifier
106 taxae0

Verbatim

e0

“376 were successfully identified and assigned to 106 taxa”

✓ located verbatim in the source · abstract, characters 792–849 · show in text ↑
t0

“root fungal isolates from disturbed and undisturbed Arctic and alpine tundra habitats in Northern Quebec, Canada”

✓ located verbatim in the source · title, characters 50–162 · show in text ↑
e1

“plants from disturbed sites had a greater affinity for dark septate endophytes”

✓ located verbatim in the source · abstract, characters 1291–1369 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Commonly isolated groups included the Rhizoscyphus ericae aggregate, dark septate endophytes, Umbelopsis rammaniana and Mortierella sp.

Taxon
plantsViridiplantaee1
Interactor
Rhizoscyphus ericae aggregateHyaloscypha cf. hepaticicolae0symbiont
Outcome
most commonly isolated fungie0
Qualifier
the dark septate endophytes, and Umbelopsis rammaniana and Mortierella sp.e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hyaloscypha cf. hepaticicola
Hyaloscypha cf. hepaticicola · Interactor · picture of its genus (no picture of exactly this name)Jerry Cooper · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The most commonly isolated fungi belonged to three genetically related groups: the Rhizoscyphus ericae aggregate, the dark septate endophytes, and Umbelopsis rammaniana and Mortierella sp.”

✓ located verbatim in the source · abstract, characters 933–1121 · show in text ↑
t0

“root fungal isolates from disturbed and undisturbed Arctic and alpine tundra habitats in Northern Quebec, Canada”

✓ located verbatim in the source · title, characters 50–162 · show in text ↑
e1

“plants from disturbed sites had a greater affinity for dark septate endophytes”

✓ located verbatim in the source · abstract, characters 1291–1369 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

These fungal groups occurred at both disturbed and natural sites.

Taxon
plantsViridiplantaee1
Outcome
present on both disturbed and natural sitese0
Setting
disturbed and natural sitese0

Verbatim

e0

“These groups were present on both disturbed and natural sites”

✓ located verbatim in the source · abstract, characters 1208–1269 · show in text ↑
t0

“root fungal isolates from disturbed and undisturbed Arctic and alpine tundra habitats in Northern Quebec, Canada”

✓ located verbatim in the source · title, characters 50–162 · show in text ↑
e1

“plants from disturbed sites had a greater affinity for dark septate endophytes”

✓ located verbatim in the source · abstract, characters 1291–1369 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Plants from disturbed sites appeared to have greater affinity for dark septate endophytes.

Taxon
plantsViridiplantaee0
Interactor
dark septate endophytese0symbiont
Outcome
affinity for dark septate endophytese0
Direction
greatere0
Setting
disturbed sitese0

Verbatim

e0

“plants from disturbed sites had a greater affinity for dark septate endophytes”

✓ located verbatim in the source · abstract, characters 1291–1369 · show in text ↑