Paper · 2026 · PLoS ONE

High resolution mapping of agro-morphological and grain traits in bread wheat using SNP-based QTL analysis

Vasudha Jadon; Rahul Gajghate; Narayana Bhat Devate; et al.

8
claims
17
verbatim quotes
1
citations
2
research areas
✓
Open access · cc-by

Abstract

Wheat (Triticum aestivum L.) is among the most extensively grown staple crops worldwide. A set of 188 recombinant inbred lines (RILs) derived from a cross between HD2932 and Synthetic 46 was evaluated over three consecutive years (2021-22, 2022-23, and 2023-24) for plant height (PH), spike length (SL), spikelets per spike (SPS), thousand kernel weight (TKW), kernel length (KL), kernel width (KW), and kernel thickness (KT). The population displayed wide phenotypic variability with quantitative inheritance for all the traits. High-density genotyping was performed using 910 SSR markers and a 35K SNP array. Twenty-eight QTLs, including six for PH, two for SL, three for SPS, two for TKW, five for KL, six for KW, and four for KT distributed across 16 chromosomes were identified. QTkw.iari_4B, flanked by Xgwm149-AX-94559916, was detected in all three environments (Q × E not formally tested) consistently and co-localized with QTLs for PH, KL, and KT, indicating a potentially important genomic region for yield improvement. Promising lines such as RIL 122 and RIL 66 exhibited superior kernel characteristics, while RIL 155 showed lower expression values. In silico analysis identified 28 candidate genes within these QTL regions, offering insights into trait regulation. These findings may serve as potential resources for marker-assisted selection in wheat breeding programs to enhance yield and grain quality parameters.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

The RIL population showed wide variability and quantitative inheritance across all studied traits.

Outcome
wide phenotypic variability with quantitative inheritancee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The population displayed wide phenotypic variability with quantitative inheritance for all the traits.”

✓ located verbatim in the source · abstract, characters 427–529 · show in text ↑
e1

“Wheat (Triticum aestivum L.)”

✓ located verbatim in the source · abstract, characters 0–28 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Twenty-eight QTLs for seven traits were identified on 16 chromosomes.

Outcome
Twenty-eight QTLse0
Value
Twenty-eighte0
Qualifier
16 chromosomese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Twenty-eight QTLs, including six for PH, two for SL, three for SPS, two for TKW, five for KL, six for KW, and four for KT distributed across 16 chromosomes were identified.”

✓ located verbatim in the source · abstract, characters 611–783 · show in text ↑
e1

“Wheat (Triticum aestivum L.)”

✓ located verbatim in the source · abstract, characters 0–28 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

QTkw.iari_4B was detected in all three environments.

Taxon
bread wheatTriticum aestivumt0
Gene
QTkw.iari_4Be0
Outcome
detected in all three environmentse0
Qualifier
Q × E not formally testede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“QTkw.iari_4B, flanked by Xgwm149-AX-94559916, was detected in all three environments (Q × E not formally tested) consistently”

✓ located verbatim in the source · abstract, characters 784–909 · show in text ↑
t0

“bread wheat”

✓ located verbatim in the source · title, characters 66–77 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

QTkw.iari_4B co-localized with QTLs for PH, KL and KT.

Taxon
bread wheatTriticum aestivumt0
Gene
QTkw.iari_4Be1
Outcome
co-localized with QTLs for PH, KL, and KTe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“co-localized with QTLs for PH, KL, and KT”

✓ located verbatim in the source · abstract, characters 914–955 · show in text ↑
e1

“QTkw.iari_4B, flanked by Xgwm149-AX-94559916”

✓ located verbatim in the source · abstract, characters 784–828 · show in text ↑
t0

“bread wheat”

✓ located verbatim in the source · title, characters 66–77 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

RIL 122 had superior kernel characteristics.

Taxon
bread wheatTriticum aestivumt0
Material
RIL 122e0
Outcome
kernel characteristicse0
Direction
superiore0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Promising lines such as RIL 122 and RIL 66 exhibited superior kernel characteristics”

✓ located verbatim in the source · abstract, characters 1030–1114 · show in text ↑
t0

“bread wheat”

✓ located verbatim in the source · title, characters 66–77 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

RIL 66 had superior kernel characteristics.

Taxon
bread wheatTriticum aestivumt0
Material
RIL 66e0
Outcome
kernel characteristicse0
Direction
superiore0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Promising lines such as RIL 122 and RIL 66 exhibited superior kernel characteristics”

✓ located verbatim in the source · abstract, characters 1030–1114 · show in text ↑
t0

“bread wheat”

✓ located verbatim in the source · title, characters 66–77 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

RIL 155 showed lower expression values.

Taxon
bread wheatTriticum aestivumt0
Material
RIL 155e0
Outcome
expression valuese0
Direction
lowere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“RIL 155 showed lower expression values.”

✓ located verbatim in the source · abstract, characters 1122–1161 · show in text ↑
t0

“bread wheat”

✓ located verbatim in the source · title, characters 66–77 · show in text ↑
Observationobservedoriginal resultsimulated

Claim · model-written summary

In silico analysis identified 28 candidate genes in QTL regions.

Taxon
bread wheatTriticum aestivumt0
Outcome
candidate genese0
Value
28e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In silico analysis identified 28 candidate genes within these QTL regions”

✓ located verbatim in the source · abstract, characters 1162–1235 · show in text ↑
t0

“bread wheat”

✓ located verbatim in the source · title, characters 66–77 · show in text ↑