Abstract
Background Detailed studies of foraging behavior are needed for scientific management of the endangered rusty-patched bumblebee ( Bombus affinis ) in the disjunct and ecologically differentiated habitats it presently occupies. Current knowledge gaps hinder recovery planning but are challenging to redress through direct observation of rare interactions in the field. Methods We used genetic metabarcoding to characterize the taxonomic composition of pollen collected by B. affinis workers in the Appalachian mountains of Virginia and West Virginia from 2021–2023. We developed a custom sequence database of the regional flora and compared results for two independent genetic loci, internal transcribed spacer 1 and internal transcribed spacer 2 (ITS1 and ITS2). Results While ITS2 consistently detected more plant diversity, results from the two loci were broadly concordant with a few notable exceptions. The plant genera Hydrangea , Actaea , Rhododendron , Tilia , and (unexpectedly) Laportea were prominent in midsummer samples, with Rubus a consistent contributor in late spring and early summer. Pea flowers (family Fabaceae) were relatively infrequent but the genera Securigera and Trifolium were detected before the Hydrangea bloom and again in late summer afterwards. The diversity of forage plants was highest in late summer, driven primarily by various genera of Asteraceae. Comparing the current data with previous work indicates regional differentiation in forage plants between Appalachia and the upper Midwest, but also allows ‘consensus’ forage sources that are supported by multiple lines of evidence and shared between regions to be tabulated. These results should help managers focus survey efforts for this endangered species and plan habitat enhancements.
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Claims 6
Claim · model-written summary
Hydrangea, Actaea, Rhododendron, Tilia and Laportea were prominent in midsummer pollen samples
- Interactor
- B. affinis
Bombus affinise2pollinator - Outcome
- prominente1
Organisms pictured · Representative pictures of the matched species, not figures from the paper.

.jpg?width=500)
Verbatim
t0“Bombus affinis”
e2“pollen collected by B. affinis workers”
e1“The plant genera Hydrangea , Actaea , Rhododendron , Tilia , and (unexpectedly) Laportea were prominent in midsummer samples”
Claim · model-written summary
Rubus was a consistent forage contributor in late spring and early summer
- Interactor
- B. affinis
Bombus affinise2pollinator - Outcome
- consistent contributore3
Organisms pictured · Representative pictures of the matched species, not figures from the paper.

.jpg?width=500)
Verbatim
t0“Bombus affinis”
e2“pollen collected by B. affinis workers”
e3“with Rubus a consistent contributor in late spring and early summer”
Claim · model-written summary
Securigera and Trifolium were detected before the Hydrangea bloom and again in late summer
- Taxon
- Securigera and Trifolium
Trifolium
Securigerae4 - Interactor
- B. affinis
Bombus affinise2pollinator - Outcome
- were detectede4
- Qualifier
- before the Hydrangea bloom and again in late summer afterwardse4
Organisms pictured · Representative pictures of the matched species, not figures from the paper.


.jpg?width=500)
Verbatim
t0“Bombus affinis”
e2“pollen collected by B. affinis workers”
e4“the genera Securigera and Trifolium were detected before the Hydrangea bloom and again in late summer afterwards”
Claim · model-written summary
ITS2 detected more plant diversity than ITS1 in pollen metabarcoding
Verbatim
t0“Bombus affinis”
e5“While ITS2 consistently detected more plant diversity, results from the two loci were broadly concordant with a few notable exceptions”
e6“internal transcribed spacer 1 and internal transcribed spacer 2 (ITS1 and ITS2)”
Claim · model-written summary
Forage plant diversity was highest in late summer, driven by Asteraceae
- Taxon
- AsteraceaeAsteraceaee7
- Interactor
- B. affinis
Bombus affinise2pollinator - Outcome
- diversity of forage plantse7
- Setting
- late summere7
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
.jpg?width=500)
Verbatim
t0“Bombus affinis”
e2“pollen collected by B. affinis workers”
e7“The diversity of forage plants was highest in late summer, driven primarily by various genera of Asteraceae”
Claim · model-written summary
Forage plants differ regionally between Appalachia and the upper Midwest
Verbatim
t0“Bombus affinis”
e1“Comparing the current data with previous work indicates regional differentiation in forage plants between Appalachia and the upper Midwest”