Paper · 2016 · Van Yüzüncü Yıl University Academic Data Management System

MOLECULAR PHYLOGENY OF TRITICUM AND AEGILOPS GENERA BASED ON ITS AND MATK SEQUENCE DATA

Kansu, Cigdem; Dizkirici, Ayten; ÖNDE, SERTAÇ

7
claims
7
verbatim quotes
0
citations
2
research areas
—
Not open access

Abstract

Understanding the phylogenetic relationship between Triticum and Aegilops species, which form a vast gene pool of wheat, is very important for breeding new cultivated wheat varieties. In the present study, phylogenetic relationships between Triticum (12 samples from 4 species) and Aegilops (24 samples from 8 species) were investigated using sequences of the nuclear ITS rDNA gene and partial sequences of the matK gene of chloroplast genome. The phylogenetic relationships among species were reconstructed using Maximum Likelihood method. The constructed tree based on the sequences of the nuclear component (ITS) displayed a close relationship between polyploid wheats and Aegilops speltoides species which provided new evidence for the source of the enigmatic B genome donor as Ae. speltoides. Concurrent clustering of Ae. cylindrica and Ae. tauschii and their close positioning to polyploid wheats pointed the source of the D genome as one of these species. As reported before, diploid Triticum species (i.e. T. urartu) were identified as the A genome donors and the positioning of these diploid wheats on the constructed tree are meaningful. The constructed tree based on the chloroplastic matK sequences displayed same relationship between polyploid wheats and Ae. speltoides species providing evidence for the later species being the chloroplast donors for polyploid wheats. Therefore, our results supported the idea of coinheritance of nuclear and chloroplast genomes where Ae. speltoides was the maternal donor. For both trees the remaining Aegilops species produced a distinct cluster whereas with the exception of T. urartu, diploid Triticum species displayed a monophyletic structure.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

ITS phylogeny placed polyploid wheats close to Aegilops speltoides, supporting it as B genome donor.

Taxon
Aegilops speltoidesAegilops speltoidese0
Gene
B genomee0
Outcome
close relationship between polyploid wheats and Aegilops speltoides speciese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Aegilops speltoides
Aegilops speltoides · TaxonJose Hernandez · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The constructed tree based on the sequences of the nuclear component (ITS) displayed a close relationship between polyploid wheats and Aegilops speltoides species which provided new evidence for the source of the enigmatic B genome donor as Ae. speltoides”

✓ located verbatim in the source · abstract, characters 541–796 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Ae. cylindrica and Ae. tauschii clustered together near polyploid wheats, suggesting a D genome donor among them.

Taxon
Ae. cylindrica and Ae. tauschiie0
Gene
D genomee0
Outcome
Concurrent clustering of Ae. cylindrica and Ae. tauschiie0

Verbatim

e0

“Concurrent clustering of Ae. cylindrica and Ae. tauschii and their close positioning to polyploid wheats pointed the source of the D genome as one of these species”

✓ located verbatim in the source · abstract, characters 798–961 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The study identified diploid Triticum species as A genome donors.

Taxon
diploid Triticum speciese0
Gene
A genomee0
Outcome
A genome donorse0

Verbatim

e0

“diploid Triticum species (i.e. T. urartu) were identified as the A genome donors”

✓ located verbatim in the source · abstract, characters 983–1063 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The matK tree linked polyploid wheats to Ae. speltoides, supporting chloroplast donation.

Taxon
Ae. speltoidese0
Gene
matKe0
Outcome
chloroplast donors for polyploid wheatse0

Verbatim

e0

“The constructed tree based on the chloroplastic matK sequences displayed same relationship between polyploid wheats and Ae. speltoides species providing evidence for the later species being the chloroplast donors for polyploid wheats”

✓ located verbatim in the source · abstract, characters 1148–1381 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The results supported coinheritance of nuclear and chloroplast genomes with Ae. speltoides as maternal donor.

Taxon
Ae. speltoidese0
Outcome
maternal donore0

Verbatim

e0

“our results supported the idea of coinheritance of nuclear and chloroplast genomes where Ae. speltoides was the maternal donor”

✓ located verbatim in the source · abstract, characters 1394–1520 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Remaining Aegilops species formed a distinct cluster in both trees.

Taxon
Aegilops speciesAegilopse0
Outcome
distinct clustere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Aegilops
Aegilops · TaxonJavier martin · Public domain · Wikimedia Commons ↗

Verbatim

e0

“For both trees the remaining Aegilops species produced a distinct cluster”

✓ located verbatim in the source · abstract, characters 1522–1595 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Diploid Triticum species other than T. urartu formed a monophyletic structure.

Taxon
diploid Triticum speciese0
Outcome
monophyletic structuree0
Qualifier
with the exception of T. urartue0

Verbatim

e0

“with the exception of T. urartu, diploid Triticum species displayed a monophyletic structure”

✓ located verbatim in the source · abstract, characters 1604–1696 · show in text ↑