Paper · 2026 · International Journal of Molecular Sciences

Computational Predictions and Evolutionary Analysis of LrK10 Kinase-Related Putative PSTOL1 Gene Homeologs in Wheat and Orthologs of Its Wild Relatives

Karthikeyan Thiyagarajan; Kalenahalli Yogendra; Carolina Saint Pierre; et al.

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claims
12
verbatim quotes
0
citations
1
research areas
✓
Open access · cc-by

Abstract

Phosphorus Starvation Tolerance 1 in rice (OsPSTOL1, known as Phosphorus uptake 1, Pup1) is a receptor-like cytoplasmic protein kinase that confers tolerance to phosphorus deficiency. The OsPSTOL1 gene possesses a Ser/Thr kinase and shows high amino-acid sequence similarity with the leaf rust receptor-like kinase (OsLrK10). We hypothesise that the putative wheat genes TaPSTOL1 and TaLrK10 have a common ancestral origin and that putative TaPSTOL1 diverged recently, acquiring new structural modifications and biological functions in the process. In this study, we identified all putative TaPSTOL1 homeologs and examined the evolutionary relationship between TaPSTOL1 and TaLrK10 in Triticum species. Our results indicate that the putative TaPSTOL1 diverged recently without possessing the amino-terminal domain, which is a typical characteristic of TaLrK10. We observed numerous conversion tracts between these two genes, and the substitution pattern of randomly selected amino acids indicates that dynamic selection pressures acted on both genes. The putative TaPSTOL1 shows high nucleotide diversity compared to TaLrK10 within Triticum species. Further, a multiple-sequence analysis reveals that the third exon of TaLrK10 appears to have been duplicated and diverged as a putative single-exon-based TaPSTOL1 in bread wheat. Overall, our comparative analysis indicates that both TaPSTOL1 and TaLrK10 appear to have diverged from a common ancestor, acquiring distinct structural organisations and biological functions.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

Putative TaPSTOL1 homeologs were identified.

Gene
TaPSTOL1e0
Outcome
all putative TaPSTOL1 homeologse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“we identified all putative TaPSTOL1 homeologs”

✓ located verbatim in the source · abstract, characters 564–609 · show in text ↑
t0

“in Wheat”

✓ located verbatim in the source · title, characters 107–115 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Putative TaPSTOL1 diverged recently without the amino-terminal domain typical of TaLrK10.

Gene
TaPSTOL1e0
Outcome
diverged recently without possessing the amino-terminal domaine0
Comparator
TaLrK10e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the putative TaPSTOL1 diverged recently without possessing the amino-terminal domain, which is a typical characteristic of TaLrK10”

✓ located verbatim in the source · abstract, characters 729–859 · show in text ↑
t0

“in Wheat”

✓ located verbatim in the source · title, characters 107–115 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Numerous conversion tracts occurred between TaPSTOL1 and TaLrK10.

Taxon
TriticumTriticume1
Gene
TaPSTOL1e1
Outcome
numerous conversion tractse0
Comparator
TaLrK10e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum
Triticum · Taxon · picture from its Wikimedia Commons categoryMottaW · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“numerous conversion tracts between these two genes”

✓ located verbatim in the source · abstract, characters 873–923 · show in text ↑
e1

“between TaPSTOL1 and TaLrK10 in Triticum species”

✓ located verbatim in the source · abstract, characters 653–701 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Substitution patterns indicate dynamic selection on both genes.

Taxon
TriticumTriticume1
Gene
TaPSTOL1e1
Outcome
dynamic selection pressurese0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum
Triticum · Taxon · picture from its Wikimedia Commons categoryMottaW · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the substitution pattern of randomly selected amino acids indicates that dynamic selection pressures acted on both genes”

✓ located verbatim in the source · abstract, characters 929–1049 · show in text ↑
e1

“between TaPSTOL1 and TaLrK10 in Triticum species”

✓ located verbatim in the source · abstract, characters 653–701 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Putative TaPSTOL1 had high nucleotide diversity relative to TaLrK10.

Taxon
TriticumTriticume0
Gene
TaPSTOL1e0
Outcome
nucleotide diversitye0
Direction
highe0
Comparator
TaLrK10e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum
Triticum · Taxon · picture from its Wikimedia Commons categoryMottaW · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The putative TaPSTOL1 shows high nucleotide diversity compared to TaLrK10 within Triticum species”

✓ located verbatim in the source · abstract, characters 1051–1148 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The third exon of TaLrK10 appears duplicated and diverged as single-exon TaPSTOL1 in bread wheat.

Taxon
bread wheatTriticum aestivume0
Gene
TaLrK10e0
Outcome
duplicated and diverged as a putative single-exon-based TaPSTOL1e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the third exon of TaLrK10 appears to have been duplicated and diverged as a putative single-exon-based TaPSTOL1 in bread wheat”

✓ located verbatim in the source · abstract, characters 1201–1327 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

TaPSTOL1 and TaLrK10 appear to share a common ancestor and have distinct structural organizations and functions.

Gene
TaPSTOL1e0
Outcome
diverged from a common ancestor, acquiring distinct structural organisations and biological functionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“both TaPSTOL1 and TaLrK10 appear to have diverged from a common ancestor, acquiring distinct structural organisations and biological functions”

✓ located verbatim in the source · abstract, characters 1378–1520 · show in text ↑
t0

“in Wheat”

✓ located verbatim in the source · title, characters 107–115 · show in text ↑