Paper · 2026

Unraveling historical genetic divergence and gene flow patterns between island (Taiwan) and mainland (China) of Fagus hayatae

施慧娟

15
claims
30
verbatim quotes
0
citations
2
research areas
—
Not open access

Abstract

[[abstract]]The disjunctive distribution of Fagus hayatae between Taiwan and mainland China provides a unique framework for understanding phylogeographic patterns and evolutionary processes in relict tree species. This study investigated the genetic diversity, population structure, and phylogeographic history of F. hayatae using microsatellite and chloroplast DNA markers. Analysis of 249 samples from nine populations revealed that Taiwanese populations possess higher genetic diversity with significant inbreeding, while mainland Chinese populations showed lower diversity and inbreeding levels. Chloroplast DNA analysis identified eight haplotypes, with unique variants in Taiwanese populations. AMOVA confirmed significant genetic differentiation between the two regions, revealing four distinct clustering patterns and three clear phylogenetic clades, including an earlydiverging Taiwanese TS population. Molecular divergence time estimation based on chloroplast DNA sequences indicates a temporal divergence pattern within F. hayatae populations, with the Taiwanese TS lineage exhibiting an earlier separation event, followed by subsequent divergence between other Taiwanese populations (PCTS and AW) and mainland Chinese populations (CH). These phylogeographic events temporally correspond with significant paleoclimatic and geotectonic episodes in East Asia. Demographic and historical biogeography inference revealed a recent population decline in Taiwan, in contrast to more stable population dynamics on the mainland, while historical gene flow between the regions remains limited, and suggested several dispersals and vicariant events influencing the current genetic structure. These findings not only delineate the genetic structure shaped by historical geographic isolation and contemporary evolutionary processes but also emphasize Taiwan’s role as a genetic refugium for F. hayatae.

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Claims 15

Associationobservedoriginal resultmeasured

Claim · model-written summary

Taiwanese populations have higher genetic diversity than mainland Chinese populations.

Taxon
Fagus hayataeFagus hayataet0
Material
Taiwanese populationse1
Outcome
genetic diversitye1
Direction
highere1
Comparator
mainland Chinese populationse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e1

“Taiwanese populations possess higher genetic diversity with significant inbreeding, while mainland Chinese populations showed lower diversity and inbreeding levels”

✓ located verbatim in the source · abstract, characters 435–598 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Taiwanese populations show significant inbreeding.

Taxon
Fagus hayataeFagus hayataet0
Material
Taiwanese populationse1
Outcome
inbreedinge1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e1

“Taiwanese populations possess higher genetic diversity with significant inbreeding, while mainland Chinese populations showed lower diversity and inbreeding levels”

✓ located verbatim in the source · abstract, characters 435–598 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Mainland Chinese populations have lower inbreeding levels than Taiwanese populations.

Taxon
Fagus hayataeFagus hayataet0
Material
mainland Chinese populationse1
Outcome
inbreeding levelse1
Direction
lowere1
Comparator
Taiwanese populationse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e1

“Taiwanese populations possess higher genetic diversity with significant inbreeding, while mainland Chinese populations showed lower diversity and inbreeding levels”

✓ located verbatim in the source · abstract, characters 435–598 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Chloroplast DNA analysis identified eight haplotypes.

Taxon
Fagus hayataeFagus hayataet0
Outcome
haplotypese2
Value
eighte2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e2

“Chloroplast DNA analysis identified eight haplotypes, with unique variants in Taiwanese populations”

✓ located verbatim in the source · abstract, characters 600–699 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Chloroplast DNA haplotypes include unique variants in Taiwanese populations.

Taxon
Fagus hayataeFagus hayataet0
Material
Taiwanese populationse2
Outcome
unique variantse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e2

“Chloroplast DNA analysis identified eight haplotypes, with unique variants in Taiwanese populations”

✓ located verbatim in the source · abstract, characters 600–699 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

AMOVA confirmed significant genetic differentiation between the two regions.

Taxon
Fagus hayataeFagus hayataet0
Outcome
genetic differentiatione3
Qualifier
between the two regionse3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e3

“AMOVA confirmed significant genetic differentiation between the two regions”

✓ located verbatim in the source · abstract, characters 701–776 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AMOVA revealed four distinct clustering patterns.

Taxon
Fagus hayataeFagus hayataet0
Outcome
clustering patternse4
Value
foure4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e4

“revealing four distinct clustering patterns”

✓ located verbatim in the source · abstract, characters 778–821 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Three clear phylogenetic clades were identified.

Taxon
Fagus hayataeFagus hayataet0
Outcome
phylogenetic cladese5
Value
threee5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e5

“three clear phylogenetic clades”

✓ located verbatim in the source · abstract, characters 826–857 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The Taiwanese TS population is early-diverging.

Taxon
Fagus hayataeFagus hayataet0
Material
Taiwanese TS populatione6
Outcome
earlydiverginge6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e6

“an earlydiverging Taiwanese TS population”

✓ located verbatim in the source · abstract, characters 869–910 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The Taiwanese TS lineage shows an earlier separation event.

Taxon
Fagus hayataeFagus hayataet0
Material
Taiwanese TS lineagee7
Outcome
earlier separation evente7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e7

“with the Taiwanese TS lineage exhibiting an earlier separation event”

✓ located verbatim in the source · abstract, characters 1055–1123 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Other Taiwanese populations (PCTS and AW) diverged subsequently from mainland Chinese populations (CH).

Taxon
Fagus hayataeFagus hayataet0
Material
PCTS and AWe1
Outcome
subsequent divergencee1
Comparator
mainland Chinese populations (CH)e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e1

“followed by subsequent divergence between other Taiwanese populations (PCTS and AW) and mainland Chinese populations (CH)”

✓ located verbatim in the source · abstract, characters 1125–1246 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Phylogeographic events temporally correspond with paleoclimatic and geotectonic episodes in East Asia.

Taxon
Fagus hayataeFagus hayataet0
Outcome
phylogeographic eventse1
Qualifier
temporally corresponde1
Setting
East Asiae1

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e1

“These phylogeographic events temporally correspond with significant paleoclimatic and geotectonic episodes in East Asia”

✓ located verbatim in the source · abstract, characters 1248–1367 · show in text ↑
Associationobservedoriginal resultsimulated

Claim · model-written summary

Taiwan shows a recent population decline, in contrast to more stable population dynamics on the mainland.

Taxon
Fagus hayataeFagus hayataet0
Outcome
population declinee1
Direction
decreaseinferrede1
Comparator
more stable population dynamics on the mainlande1
Setting
Taiwane1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e1

“Demographic and historical biogeography inference revealed a recent population decline in Taiwan, in contrast to more stable population dynamics on the mainland”

✓ located verbatim in the source · abstract, characters 1369–1529 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Historical gene flow between Taiwan and the mainland is limited.

Taxon
Fagus hayataeFagus hayataet0
Outcome
historical gene flowe1
Qualifier
remains limitede1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e1

“historical gene flow between the regions remains limited”

✓ located verbatim in the source · abstract, characters 1537–1593 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Several dispersals and vicariant events influenced the current genetic structure (author interpretation).

Taxon
Fagus hayataeFagus hayataet0
Outcome
current genetic structuree1
Qualifier
several dispersals and vicariant eventse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fagus hayatae
Fagus hayatae · Taxon邵宥銘 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Fagus hayatae”

✓ located verbatim in the source · title, characters 112–125 · show in text ↑
e1

“suggested several dispersals and vicariant events influencing the current genetic structure”

✓ located verbatim in the source · abstract, characters 1599–1690 · show in text ↑