By interacting organism as written › RYVV

Observationobservedoriginal resultmeasured

Claim · model-written summary

RYVV isolates showed up to 10% genetic differences.

Taxon: Rosese0
Interactor: RYVVe6pathogen
Outcome: genetic differencese6
Value: up to 10%e6

Verbatim

e0
“Roses are among the most important ornamental plants in the world”
✓ located verbatim in the source · abstract, characters 0–65

e6
“RYVV, which is known to exist in a very limited number of countries, has been found to have up to 10% genetic differences and phylogenetically, three different groups were determined”
✓ located verbatim in the source · abstract, characters 1565–1747

Title

Prevalence and molecular characterization of Turkish isolates of the rose viruses

Ali Karanfil Crop Protection 2021. doi:10.1016/j.cropro.2021.105565

Other claims from this paper (12)

Observation 94.27% of the rose samples were infected with at least one virus.
Observation PNRSV caused the most virus infections in roses.
Observation ApMV caused the least virus infections in roses.
Observation PNRSV and RCV-1 infections were detected in rose plants, with RSDaV also detected.
Observation RYVV and ApMV infections were detected in rose plants.
Observation PNRSV, RCV-1 and RSDaV isolates showed high sequence homology with each other and with world isolates.
Observation ApMV isolates from roses formed separate groups phylogenetically.
Observation RYVV isolates were determined to form three different phylogenetic groups.
Observation RCV-1 and RSDaV were first reported in Turkey in roses.
Observation Turkey is still free of rose rosette virus.
Observation PNRSV is a significant virus disease for rose plants in Turkey.
Recommendation Quarantine measures against rose viruses should continue to be strictly enforced in Turkey.

Observationobservedoriginal resultmeasured

Claim · model-written summary

RYVV isolates were determined to form three different phylogenetic groups.

Taxon: Rosese0
Interactor: RYVVe6pathogen
Outcome: three different groups were determinede6
Value: threee6

Verbatim

e0
“Roses are among the most important ornamental plants in the world”
✓ located verbatim in the source · abstract, characters 0–65

e6
“RYVV, which is known to exist in a very limited number of countries, has been found to have up to 10% genetic differences and phylogenetically, three different groups were determined”
✓ located verbatim in the source · abstract, characters 1565–1747

Title

Prevalence and molecular characterization of Turkish isolates of the rose viruses

Ali Karanfil Crop Protection 2021. doi:10.1016/j.cropro.2021.105565

Other claims from this paper (12)

Observation 94.27% of the rose samples were infected with at least one virus.
Observation PNRSV caused the most virus infections in roses.
Observation ApMV caused the least virus infections in roses.
Observation PNRSV and RCV-1 infections were detected in rose plants, with RSDaV also detected.
Observation RYVV and ApMV infections were detected in rose plants.
Observation PNRSV, RCV-1 and RSDaV isolates showed high sequence homology with each other and with world isolates.
Observation ApMV isolates from roses formed separate groups phylogenetically.
Observation RYVV isolates showed up to 10% genetic differences.
Observation RCV-1 and RSDaV were first reported in Turkey in roses.
Observation Turkey is still free of rose rosette virus.
Observation PNRSV is a significant virus disease for rose plants in Turkey.
Recommendation Quarantine measures against rose viruses should continue to be strictly enforced in Turkey.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Rose yellow vein virus was first reported in Turkey.

Taxon: Rose (Rosa damascena)Rosa ×damascenae0
Interactor: RYVVe1pathogen
Outcome: first report of RYVVe1
Setting: Turkeye1

Verbatim

e0
“Rose (Rosa damascena) is grown as an ornamental plant in every region of Turkey”
✓ located verbatim in the source · abstract, characters 0–79

e1
“To our knowledge, this is the first report of RYVV in Turkey”
✓ located verbatim in the source · abstract, characters 2172–2232

Title

First report of Rose yellow vein virus in Turkey

A. Karanfil; F. Randa‐Zelyüt; F. Ertunç; et al. New Disease Reports 2018. doi:10.5197/j.2044-0588.2018.038.011

Other claims from this paper (6)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Symptoms consistent with RYVV infection were observed on roses in Canakkale and Ankara provinces in 2016 and 2017.

Taxon: rosese2
Organ / stage: leavese2
Interactor: RYVVe2pathogen
Outcome: symptoms consistent with infection with RYVVe2
Setting: Canakkale and Ankara provinces of Turkeye2

Verbatim

e2
“symptoms consistent with infection with RYVV were observed on leaves of roses in the Canakkale and Ankara provinces of Turkey”
✓ located verbatim in the source · abstract, characters 542–667

Title

First report of Rose yellow vein virus in Turkey

A. Karanfil; F. Randa‐Zelyüt; F. Ertunç; et al. New Disease Reports 2018. doi:10.5197/j.2044-0588.2018.038.011

Other claims from this paper (6)

Observation Rose yellow vein virus was first reported in Turkey.
Observation RYVV PCR gave the expected 766 bp product from 15 of 26 rose samples.
Observation Turkish and other RYVV isolates share 96-97% nucleotide and 97-98% amino acid identity.
Observation The Turkish isolate clustered with other RYVV isolates in the phylogenetic tree.
Observation RYVV was first reported in both Europe and Asia.
Observation RYVV may be more widely distributed than previously reported.

Observationobservedoriginal resultmeasured

Claim · model-written summary

Turkish and other RYVV isolates share 96-97% nucleotide and 97-98% amino acid identity.

Taxon: Rose (Rosa damascena)Rosa ×damascenae0
Interactor: RYVVe4pathogen
Outcome: identities at nucleotide and amino acid levele4
Value: 96-97% and 97-98%e4
Comparator: other RYVV isolatese4

Verbatim

e0
“Rose (Rosa damascena) is grown as an ornamental plant in every region of Turkey”
✓ located verbatim in the source · abstract, characters 0–79

e4
“The identities at nucleotide and amino acid level between Turkish and other RYVV isolates were determined using a partial 663 bp sequence of the CP gene after alignment with ClustalW, and ranged from 96-97% and 97-98% identity, respectively”
✓ located verbatim in the source · abstract, characters 1754–1994

Title

First report of Rose yellow vein virus in Turkey

A. Karanfil; F. Randa‐Zelyüt; F. Ertunç; et al. New Disease Reports 2018. doi:10.5197/j.2044-0588.2018.038.011

Other claims from this paper (6)

Observation Rose yellow vein virus was first reported in Turkey.
Observation Symptoms consistent with RYVV infection were observed on roses in Canakkale and Ankara provinces in 2016 and 2017.
Observation RYVV PCR gave the expected 766 bp product from 15 of 26 rose samples.
Observation The Turkish isolate clustered with other RYVV isolates in the phylogenetic tree.
Observation RYVV was first reported in both Europe and Asia.
Observation RYVV may be more widely distributed than previously reported.

Observationobservedoriginal resultmeasured

Claim · model-written summary

The Turkish isolate clustered with other RYVV isolates in the phylogenetic tree.

Taxon: Rose (Rosa damascena)Rosa ×damascenae0
Material: Turkish isolatee5
Interactor: RYVVe5pathogen
Outcome: clustered with other RYVV isolatese5

Verbatim

e0
“Rose (Rosa damascena) is grown as an ornamental plant in every region of Turkey”
✓ located verbatim in the source · abstract, characters 0–79

e5
“the Turkish isolate clustered with other RYVV isolates”
✓ located verbatim in the source · abstract, characters 2107–2161

Title

First report of Rose yellow vein virus in Turkey

A. Karanfil; F. Randa‐Zelyüt; F. Ertunç; et al. New Disease Reports 2018. doi:10.5197/j.2044-0588.2018.038.011

Other claims from this paper (6)

Observation Rose yellow vein virus was first reported in Turkey.
Observation Symptoms consistent with RYVV infection were observed on roses in Canakkale and Ankara provinces in 2016 and 2017.
Observation RYVV PCR gave the expected 766 bp product from 15 of 26 rose samples.
Observation Turkish and other RYVV isolates share 96-97% nucleotide and 97-98% amino acid identity.
Observation RYVV was first reported in both Europe and Asia.
Observation RYVV may be more widely distributed than previously reported.

Observationobservedoriginal resultmeasured

Claim · model-written summary

RYVV was first reported in both Europe and Asia.

Taxon: Rose (Rosa damascena)Rosa ×damascenae0
Interactor: RYVVe6pathogen
Outcome: first reporte6
Setting: Europe and Asiae6

Verbatim

e0
“Rose (Rosa damascena) is grown as an ornamental plant in every region of Turkey”
✓ located verbatim in the source · abstract, characters 0–79

e6
“this finding of RYVV also represents the first report in both Europe and Asia”
✓ located verbatim in the source · abstract, characters 2290–2367

Title

First report of Rose yellow vein virus in Turkey

A. Karanfil; F. Randa‐Zelyüt; F. Ertunç; et al. New Disease Reports 2018. doi:10.5197/j.2044-0588.2018.038.011

Other claims from this paper (6)

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Rose yellow vein virus was detected in two rose samples, Leda and Zephirine Drouhin.

Taxon: roset0
Material: Leda and Zephirine Drouhine0
Interactor: RYVVe0pathogen
Outcome: two samplese0
Value: two samplese0

Verbatim

e0
“Two samples (cvs. Pauls Himalayan Musk and Bloomfield) were positive for ArMV, four samples (cvs. Leda, Rosa Mundi, Charles de Mills, and Indica Major) were positive for PNRSV, and two samples (cvs. Leda and Zephirine Drouhin) were positive for RYVV.”
✓ located verbatim in the source · abstract, characters 1204–1454

t0
“rose”
✓ located after whitespace/quote normalisation · title, characters 16–20

Title

First Report of Rose yellow vein virus in Rosa sp. in New Zealand

Z. Perez-Egusquiza; L. W. Liefting; L. I. Ward Plant Disease 2012. doi:10.1094/pdis-10-12-0981-pdn

Other claims from this paper (11)

Observationobservedoriginal resultmeasured

Claim · model-written summary

RYVV movement-protein fragments had highest nucleotide identity of 98% with the type isolate.

Taxon: roset0
Interactor: RYVVe0pathogen
Gene: MPe0
Outcome: nucleotide identitye0
Value: 98%e0
Comparator: type isolate of RYVVe0

Verbatim

e0
“A BLASTn search of the MP and CP fragments showed the highest nucleotide identity of 98% and 96 to 97%, respectively, with the type isolate of RYVV (JX028536).”
✓ located verbatim in the source · abstract, characters 1840–1999

t0
“rose”
✓ located after whitespace/quote normalisation · title, characters 16–20

Title

First Report of Rose yellow vein virus in Rosa sp. in New Zealand

Z. Perez-Egusquiza; L. W. Liefting; L. I. Ward Plant Disease 2012. doi:10.1094/pdis-10-12-0981-pdn

Other claims from this paper (11)

Observationobservedoriginal resultmeasured

Claim · model-written summary

RYVV coat-protein fragments had highest nucleotide identity of 96 to 97% with the type isolate.

Taxon: roset0
Interactor: RYVVe0pathogen
Gene: CPe0
Outcome: nucleotide identitye0
Value: 96 to 97%e0
Comparator: type isolate of RYVVe0

Verbatim

e0
“A BLASTn search of the MP and CP fragments showed the highest nucleotide identity of 98% and 96 to 97%, respectively, with the type isolate of RYVV (JX028536).”
✓ located verbatim in the source · abstract, characters 1840–1999

t0
“rose”
✓ located after whitespace/quote normalisation · title, characters 16–20

Title

First Report of Rose yellow vein virus in Rosa sp. in New Zealand

Z. Perez-Egusquiza; L. W. Liefting; L. I. Ward Plant Disease 2012. doi:10.1094/pdis-10-12-0981-pdn

Other claims from this paper (11)

RYVV 14 claims

14 claims