Claim · model-written summary
Two KASP markers predicted the PF phenotype with over 96% accuracy in 494 tetraploid blackberries.
- Taxon
- tetraploid blackberriese6
- Material
- validation panel of 494 tetraploid blackberriese6
- Outcome
- predicted the PF phenotypee6
- Value
- over 96%e6
Not reportedGeneCompoundOrgan / stageInteractorInteractor roleSecond interactorSecond interactor roleTreatmentComparatorSettingDirectionQualifier
Verbatim
e6“Two diagnostic KASP markers (PF1 and PF2), designed from the most significant GWAS SNPs, predicted the PF phenotype with over 96% accuracy in a validation panel of 494 tetraploid blackberries”
Title
A single genomic region controls primocane fruiting in tetraploid blackberry
Alexander Silva-Córdoba; Isabella Vaughn; T Mason Chizk; et al. Genetics 2026. doi:10.1093/genetics/iyag078
Other claims from this paper (5)
- Association A GWAS of 365 tetraploid blackberry genotypes associated a single region on chromosome Ra03 with primocane fruiting.
- Association Genetic linkage in a biparental population confirmed that the same interval was linked to the PF phenotype.
- Observation Ten putative candidate genes were identified in the PF region.
- Observation Allele mining of 17 genotypes highlighted a CCCH-type zinc finger gene and a ubiquitin-specific protease gene as high-priority candidates.
- Observation Regulatory 3' UTR polymorphisms were identified in the zinc finger homolog.