Claim · model-written summary
Five co-expressed cassava MePME genes were filtered across abiotic stresses.
- Taxon
- Cassava
Manihot esculentat0 - Gene
- MePME1, MePME2, MePME27, MePME65 and MePME82e0
- Outcome
- co-expressed genese0
- Value
- fivee0
- Qualifier
- different abiotic stressese0
Not reportedMaterialCompoundOrgan / stageInteractorInteractor roleSecond interactorSecond interactor roleTreatmentComparatorSettingDirection
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“A total of five co-expressed genes (MePME1, MePME2, MePME27, MePME65 and MePME82) were filtered from different abiotic stresses via the use of UpSet Venn diagrams.”
t0“Cassava”
Title
Shijia Wang; Ruimei Li; Yangjiao Zhou; et al. Plants 2023. doi:10.3390/plants12132529
Other claims from this paper (19)
- Observation Eighty-nine MePME genes were identified in cassava and assigned to two types.
- Observation Cassava MePME members were unevenly located on 17 chromosomes.
- Observation Nineteen cassava MePME gene pairs were identified and were thought likely to arise from duplication.
- Observation Type-I cassava MePMEs were divided into ten subgroups.
- Observation Type-II cassava MePMEs were divided into five subgroups.
- Observation Type-I cassava MePMEs contained 11 conserved motifs.
- Observation Type-II cassava MePMEs contained eight conserved motifs.
- Observation Type-I cassava MePMEs had one to two introns in the CDS region.
- Observation Type-II cassava MePMEs had one to nine introns in the CDS region.
- Observation Twenty-one type-I cassava MePMEs contained signal peptides.
- Observation Thirty-one type-II cassava MePMEs contained signal peptides.
- Observation Most type-I cassava MePMEs had two RK/RLL and one FPSWVS domain.
- Observation Multiple stress-, hormone-, and tissue-related cis-acting regulatory elements were identified in cassava MePME promoters.
- Association Cassava MePME1 expression correlated positively with postharvest physiological deterioration.
- Intervention effect Seven-percent PEG upregulated cassava MePME1 expression significantly.
- Intervention effect Fourteen-degree low-temperature stress upregulated cassava MePME1 expression significantly.
- Intervention effect ABA treatment slightly downregulated cassava MePME1 expression.
- Observation Cassava MePME1 and MePME65 had generally higher expression than other co-expressed genes in most tissues.
- Observation The authors suggest MePME1 as a candidate gene associated with multiple abiotic tolerance in cassava.