Claim · model-written summary
Marker genes and datasets provide a single-cell and spatial transcriptomic resource.
- Taxon
- loquat
Eriobotrya japonicat0 - Outcome
- valuable resourcee0
Not reportedMaterialGeneCompoundOrgan / stageInteractorInteractor roleSecond interactorSecond interactor roleTreatmentComparatorSettingDirectionValueQualifier
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“marker genes and associated datasets generated here provide a valuable resource for advancing single-cell and spatial transcriptomic research in loquat”
t0“loquat”
Title
A single-nucleus and spatial transcriptomic atlas of the loquat shoot apex during floral bud
黄家乐(Jiale Huang) China National GeneBank DataBase 2026. doi:10.26036/cnp0007995
Other claims from this paper (10)
- Method / resource The atlas profiled 42,546 nuclei and resolved 22 clusters into seven cell types.
- Method / resource Spatial transcriptomics agreed with single-nucleus data and validated epidermal and meristem cell annotations.
- Observation Pseudotime reconstructed bifurcated external and internal tissue trajectories.
- Association Pseudotime identified genes dynamically associated with cell differentiation.
- Observation Floral initiation stages differed by 3,329 expressed genes.
- Observation Those included 67 Arabidopsis flowering-gene homologs.
- Observation The strongest transcriptional changes occurred in epidermal and shoot meristematic cells.
- Association Forty-three candidate genes were associated with pseudotime branch points.
- Mechanism Candidate genes were predicted in a photoperiod and circadian regulatory network.
- Recommendation Candidate genes are proposed as targets for functional studies and flowering-time breeding.