Claim · model-written summary
The genomic resource improved design and analysis of genome editing experiments sensitive to sequence polymorphisms.
- Taxon
- Populus tremula × P. alba
Populus tremulat0 - Outcome
- design and analysis of genome editing experimentse0
- Direction
- improvede0
Not reportedMaterialGeneCompoundOrgan / stageInteractorInteractor roleSecond interactorSecond interactor roleTreatmentComparatorSettingValueQualifier
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“The genomic resource generated for this transformation model genotype has greatly improved the design and analysis of genome editing experiments that are highly sensitive to sequence polymorphisms”
t0“Populus tremula × P. alba”
Title
Ran Zhou; Jerry W Jenkins; Yibing Zeng; et al. The Plant Journal 2023. doi:10.1111/tpj.16454
Other claims from this paper (5)
- Method / resource A telomere-to-telomere hybrid aspen genome has two chromosome-scale haplotype-resolved assemblies.
- Observation The repeat analysis identified tandem repeat array-based and array-less centromeres.
- Observation The most abundant satellite repeats in both haplotypes occur outside centromeres and form heterochromatic knobs.
- Observation PtaM147 repeats were detected exclusively in aspens.
- Observation PtaM147-like sequences occur in LTR-retrotransposons of closely related species, suggesting a retrotransposon origin.