Claim · model-written summary
Agroecosystem had a minimal effect on seed microbiota variation.
- Taxon
- rice
Oryza sativat0 - Outcome
- variation of seed microbiotae0
- Value
- R 2 =0.07e0
- Qualifier
- P=0.024e0
- Setting
- agroecosysteme0
Not reportedMaterialGeneCompoundOrgan / stageInteractorInteractor roleSecond interactorSecond interactor roleTreatmentComparatorDirection
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“agroecosystem showed a minimal effect on the variation of seed microbiota (adonis, R 2 =0.07, P=0.024)”
t0“rice”
Title
Garima Raj; Mohammad Shadab; Sujata Deka; et al. BMC Genomics 2019. doi:10.1186/s12864-019-6334-5
Other claims from this paper (11)
- Observation Sixteen culturable endophytic bacterial species were isolated from seven growth media.
- Observation Predictive analysis found plant growth promoting metabolic pathways in the seed endophytes.
- Observation Vitamin B12 biosynthesis pathways were detected in endophytes of two landraces.
- Observation Seed metagenomic reads yielded 4061 OTUs.
- Association Observed seed microbiota OTU richness differed significantly among rice genotypes.
- Association Seed microbiota also differed significantly among individual hills of a rice genotype.
- Association PCoA showed three seed microbiota clusters separated by genotype.
- Observation Bifidobacterium was abundant in the rice seed microbiota.
- Observation Faecalibacterium was abundant in the rice seed microbiota.
- Observation Lactobacillus was abundant in the rice seed microbiota.
- Association The beta diversity of seed bacteria was shaped more by genotype than agroecosystem.