Claim · model-written summary
RNA-Seq found 4,916 differentially expressed genes at 48 h after inoculation versus 0 h.
- Taxon
- Arabidopsis thaliana
Arabidopsis thalianat0 - Outcome
- differentially expressed genes (DEGs)e0
- Value
- 4,916e0
- Qualifier
- 48e0
- Comparator
- 0 h time pointe0
Not reportedMaterialGeneCompoundOrgan / stageInteractorInteractor roleSecond interactorSecond interactor roleTreatmentSettingDirection
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“RNA-Seq analysis revealed 5,360, 4,204, 4,916 and 3,741 differentially expressed genes (DEGs) at 12, 24, 48 and 72 h post-inoculation, respectively, compared with the 0 h time point.”
t0“Arabidopsis thaliana”
Title
Yong-Soon Park; Seon-Kyu Kim; Seon-Young Kim; et al. PLoS ONE 2019. doi:10.1371/journal.pone.0225976
Other claims from this paper (7)
- Observation Vibrio vulnificus infected and colonized Arabidopsis with disease symptoms at 5 and 7 days after inoculation.
- Observation RNA-Seq found 5,360 differentially expressed genes at 12 h after inoculation versus 0 h.
- Observation RNA-Seq found 4,204 differentially expressed genes at 24 h after inoculation versus 0 h.
- Observation RNA-Seq found 3,741 differentially expressed genes at 72 h after inoculation versus 0 h.
- Observation The differentially expressed genes involved chemical and hormone stimulus and plant-defense pathways.
- Intervention effect Vibrio inoculation altered genes in salicylic acid, jasmonic acid, and ethylene pathways.
- Mechanism Arabidopsis mutant analyses indicated PAMP receptors perceive Vibrio infection and activate jasmonic acid and ethylene signaling.