Paper · 2005 · Journal of the Japanese Society for Horticultural Science

An Integrated Genetic Linkage Map of Peach by SSR, STS, AFLP and RAPD

Toshiya Yamamoto; Masami Yamaguchi; Tateki Hayashi

7
claims
12
verbatim quotes
85
citations
6
research areas
✓
Open access

Abstract

An integrated genetic linkage map, based on an intraspecific peach F2 population, was constructed to include 94 simple sequence repeat (SSR) loci, 14 sequence tagged sites (STSs), 34 AFLPs, 24 RAPDs, 3 ISSRs, and 9 phenotypic traits. This map contains 178 markers placed in 8 linkage groups that correspond to the basic chromosome number of the species (n=8) with a map distance of 571 cM with an average distance of 3.2 cM between each pair of loci. Our peach genetic linkage map was completely aligned with the European Prunus reference map by using 42 common DNA markers as anchor loci and linkages; the order of all loci were conserved between the 2 maps. It also appears that this peach map covers almost the whole genome in comparison with the Prunus reference map. Nine phenotypic traits were identified in 4 linkage groups. Two kinds of root-knot nematode resistance loci Mia and Mja located on the top of linkage group 2 were very close. Two loci corresponding to flower color (Fc) and flesh color around the stone (Cs), were mapped on the linkage group 3. Flesh adhesion (F), one of the more important characteristics of stone fruits, was mapped at the bottom of linkage group 4. The positions these phenotypic traits were compared with those from other Prunus maps and their relationships were examined.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 7

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

An intraspecific peach F2 linkage map contained 178 markers across eight linkage groups spanning 571 cM, averaging 3.2 cM between loci.

Outcome
178 markers placed in 8 linkage groupse0
Value
571 cMe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“This map contains 178 markers placed in 8 linkage groups that correspond to the basic chromosome number of the species (n=8) with a map distance of 571 cM with an average distance of 3.2 cM between each pair of loci.”

✓ located verbatim in the source · abstract, characters 234–450 · show in text ↑
t0

“Peach”

✓ located verbatim in the source · title, characters 37–42 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The peach map aligned with the European Prunus reference map using 42 common markers and conserved locus order.

Outcome
completely alignede0
Value
42 common DNA markerse0
Comparator
European Prunus reference mape0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“Our peach genetic linkage map was completely aligned with the European Prunus reference map by using 42 common DNA markers as anchor loci and linkages; the order of all loci were conserved between the 2 maps.”

✓ located verbatim in the source · abstract, characters 451–659 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The peach map appeared to cover nearly the entire genome relative to the Prunus reference map.

Outcome
covers almost the whole genomee0
Comparator
Prunus reference mape0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“It also appears that this peach map covers almost the whole genome in comparison with the Prunus reference map.”

✓ located verbatim in the source · abstract, characters 660–771 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Nine phenotypic traits were identified in four linkage groups.

Outcome
Nine phenotypic traitse0
Value
4 linkage groupse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“Nine phenotypic traits were identified in 4 linkage groups.”

✓ located verbatim in the source · abstract, characters 772–831 · show in text ↑
t0

“Peach”

✓ located verbatim in the source · title, characters 37–42 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Root-knot nematode resistance loci Mia and Mja were close together atop linkage group 2.

Gene
Mia and Mjae0
Outcome
very closee0
Qualifier
top of linkage group 2e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“Two kinds of root-knot nematode resistance loci Mia and Mja located on the top of linkage group 2 were very close.”

✓ located verbatim in the source · abstract, characters 832–946 · show in text ↑
t0

“Peach”

✓ located verbatim in the source · title, characters 37–42 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Flower color Fc and flesh color Cs loci mapped to linkage group 3.

Gene
Fce0
Outcome
mapped on the linkage group 3e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“Two loci corresponding to flower color (Fc) and flesh color around the stone (Cs), were mapped on the linkage group 3.”

✓ located verbatim in the source · abstract, characters 947–1065 · show in text ↑
t0

“Peach”

✓ located verbatim in the source · title, characters 37–42 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Flesh adhesion F mapped to the bottom of linkage group 4.

Gene
Fe0
Outcome
mapped at the bottom of linkage group 4e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“Flesh adhesion (F), one of the more important characteristics of stone fruits, was mapped at the bottom of linkage group 4.”

✓ located verbatim in the source · abstract, characters 1066–1189 · show in text ↑
t0

“Peach”

✓ located verbatim in the source · title, characters 37–42 · show in text ↑