Paper · 2013 · Molecular Plant Pathology

Variations in type III effector repertoires, pathological phenotypes and host range of X anthomonas citri pv. citri pathotypes

Aline Escalon; Stéphanie Javegny; Christian Vernière; et al.

7
claims
13
verbatim quotes
54
citations
2
research areas
✓
Open access

Abstract

The mechanisms determining the host range of Xanthomonas are still undeciphered, despite much interest in their potential roles in the evolution and emergence of plant pathogenic bacteria. Xanthomonas citri pv. citri (Xci) is an interesting model of host specialization because of its pathogenic variants: pathotype A strains infect a wide range of Rutaceous species, whereas pathotype A*/A(W) strains have a host range restricted to Mexican lime (Citrus aurantifolia) and alemow (Citrus macrophylla). Based on a collection of 55 strains representative of Xci worldwide diversity assessed by amplified fragment length polymorphism (AFLP), we investigated the distribution of type III effectors (T3Es) in relation to host range. We examined the presence of 66 T3Es from xanthomonads in Xci and identified a repertoire of 28 effectors, 26 of which were shared by all Xci strains, whereas two (xopAG and xopC1) were present only in some A*/A(W) strains. We found that xopAG (=avrGf1) was present in all A(W) strains, but also in three A* strains genetically distant from A(W) , and that all xopAG-containing strains induced the hypersensitive response (HR) on grapefruit and sweet orange. The analysis of xopAD and xopAG suggested horizontal transfer between X. citri pv. bilvae, another citrus pathogen, and some Xci strains. A strains were genetically less diverse, induced identical phenotypic responses and possessed indistinguishable T3E repertoires. Conversely, A*/A(W) strains exhibited a wider genetic diversity in which clades correlated with geographical origin and T3E repertoire, but not with pathogenicity, according to T3E deletion experiments. Our data outline the importance of taking into account the heterogeneity of Xci A*/A(W) strains when analysing the mechanisms of host specialization.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

Xci strains carried 28 effectors, of which 26 were shared by all strains.

Taxon
citrusCitruse1
Interactor
Xcie0pathogen
Outcome
repertoire of 28 effectorse0
Value
28 effectorse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“identified a repertoire of 28 effectors, 26 of which were shared by all Xci strains”

✓ located verbatim in the source · abstract, characters 793–876 · show in text ↑
e1

“another citrus pathogen”

✓ located verbatim in the source · abstract, characters 1277–1300 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

xopAG and xopC1 were restricted to some A*/A(W) strains.

Taxon
citrusCitruse1
Gene
xopAG and xopC1e0
Outcome
present only in some A*/A(W) strainse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“two (xopAG and xopC1) were present only in some A*/A(W) strains”

✓ located verbatim in the source · abstract, characters 886–949 · show in text ↑
e1

“another citrus pathogen”

✓ located verbatim in the source · abstract, characters 1277–1300 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

xopAG occurred in all A(W) strains and three genetically distant A* strains.

Taxon
citrusCitruse1
Gene
xopAGe0
Outcome
present in all A(W) strainse0
Value
three A* strainse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“xopAG (=avrGf1) was present in all A(W) strains, but also in three A* strains genetically distant from A(W)”

✓ located verbatim in the source · abstract, characters 965–1072 · show in text ↑
e1

“another citrus pathogen”

✓ located verbatim in the source · abstract, characters 1277–1300 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

All xopAG-containing strains induced hypersensitive response on grapefruit and sweet orange.

Taxon
grapefruit and sweet orangeCitrus sinensisCitrus ×paradisie0
Interactor
Xanthomonas citri pv. citriXanthomonas citri pv. citrie1pathogen
Gene
xopAGe0
Outcome
hypersensitive response (HR)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus sinensis
Citrus sinensis · TaxonEllen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗
Citrus x paradisi
Citrus ×paradisi · TaxonAmada44 · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“all xopAG-containing strains induced the hypersensitive response (HR) on grapefruit and sweet orange”

✓ located verbatim in the source · abstract, characters 1084–1184 · show in text ↑
e1

“Xanthomonas citri pv. citri (Xci)”

✓ located verbatim in the source · abstract, characters 189–222 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

xopAD and xopAG analysis suggested horizontal transfer between X. citri pv. bilvae and some Xci strains.

Taxon
citrusCitruse0
Interactor
X. citri pv. bilvaeXanthomonas citri pv. bilvaee0pathogen
Gene
xopAD and xopAGe0
Outcome
horizontal transfere0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“analysis of xopAD and xopAG suggested horizontal transfer between X. citri pv. bilvae, another citrus pathogen, and some Xci strains”

✓ located verbatim in the source · abstract, characters 1190–1322 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A strains were genetically less diverse and had identical phenotypic responses and indistinguishable effector repertoires.

Taxon
citrusCitruse1
Interactor
A strainse0pathogen
Outcome
genetically less diversee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A strains were genetically less diverse, induced identical phenotypic responses and possessed indistinguishable T3E repertoires”

✓ located verbatim in the source · abstract, characters 1324–1451 · show in text ↑
e1

“another citrus pathogen”

✓ located verbatim in the source · abstract, characters 1277–1300 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

A*/A(W) clades correlated with geographic origin and effector repertoire, but not pathogenicity.

Taxon
citrusCitruse1
Interactor
A*/A(W) strainse0pathogen
Outcome
clades correlated with geographical origin and T3E repertoiree0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A*/A(W) strains exhibited a wider genetic diversity in which clades correlated with geographical origin and T3E repertoire, but not with pathogenicity”

✓ located verbatim in the source · abstract, characters 1465–1615 · show in text ↑
e1

“another citrus pathogen”

✓ located verbatim in the source · abstract, characters 1277–1300 · show in text ↑